Literature DB >> 19900254

Calibration of disease simulation model using an engineering approach.

Chung Yin Kong1, Pamela M McMahon, G Scott Gazelle.   

Abstract

OBJECTIVES: Calibrating a disease simulation model's outputs to existing clinical data is vital to generate confidence in the model's predictive ability. Calibration involves two challenges: 1) defining a total goodness-of-fit (GOF) score for multiple targets if simultaneous fitting is required, and 2) searching for the optimal parameter set that minimizes the total GOF score (i.e., yields the best fit). To address these two prominent challenges, we have applied an engineering approach to calibrate a microsimulation model, the Lung Cancer Policy Model (LCPM).
METHODS: First, 11 targets derived from clinical and epidemiologic data were combined into a total GOF score by a weighted-sum approach, accounting for the user-defined relative importance of the calibration targets. Second, two automated parameter search algorithms, simulated annealing (SA) and genetic algorithm (GA), were independently applied to a simultaneous search of 28 natural history parameters to minimize the total GOF score. Algorithm performance metrics were defined for speed and model fit.
RESULTS: Both search algorithms obtained total GOF scores below 95 within 1000 search iterations. Our results show that SA outperformed GA in locating a lower GOF. After calibrating our LCPM, the predicted natural history of lung cancer was consistent with other mathematical models of lung cancer development.
CONCLUSION: An engineering-based calibration method was able to simultaneously fit LCPM output to multiple calibration targets, with the benefits of fast computational speed and reduced the need for human input and its potential bias.

Entities:  

Mesh:

Year:  2009        PMID: 19900254      PMCID: PMC2889011          DOI: 10.1111/j.1524-4733.2008.00484.x

Source DB:  PubMed          Journal:  Value Health        ISSN: 1098-3015            Impact factor:   5.725


  28 in total

1.  A flexible modeling approach to estimating the component effects of smoking behavior on lung cancer.

Authors:  B Rachet; J Siemiatycki; M Abrahamowicz; K Leffondré
Journal:  J Clin Epidemiol       Date:  2004-10       Impact factor: 6.437

2.  Estimating long-term effectiveness of lung cancer screening in the Mayo CT screening study.

Authors:  Pamela M McMahon; Chung Yin Kong; Bruce E Johnson; Milton C Weinstein; Jane C Weeks; Karen M Kuntz; Jo-Anne O Shepard; Stephen J Swensen; G Scott Gazelle
Journal:  Radiology       Date:  2008-05-05       Impact factor: 11.105

3.  Estimation of mortality rates for disease simulation models using Bayesian evidence synthesis.

Authors:  Pamela M McMahon; Alan M Zaslavsky; Milton C Weinstein; Karen M Kuntz; Jane C Weeks; G Scott Gazelle
Journal:  Med Decis Making       Date:  2006 Sep-Oct       Impact factor: 2.583

4.  The SPECTRUM population model of the impact of screening and treatment on U.S. breast cancer trends from 1975 to 2000: principles and practice of the model methods.

Authors:  Jeanne Mandelblatt; Clyde B Schechter; William Lawrence; Bin Yi; Jennifer Cullen
Journal:  J Natl Cancer Inst Monogr       Date:  2006

5.  The costs, clinical benefits, and cost-effectiveness of screening for cervical cancer in HIV-infected women.

Authors:  S J Goldie; M C Weinstein; K M Kuntz; K A Freedberg
Journal:  Ann Intern Med       Date:  1999-01-19       Impact factor: 25.391

6.  An epidemiological study of lung cancer: history and histological types in a general population in northern Finland.

Authors:  R Mäkitaro; P Pääkkö; E Huhti; R Bloigu; V L Kinnula
Journal:  Eur Respir J       Date:  1999-02       Impact factor: 16.671

7.  Adopting helical CT screening for lung cancer: potential health consequences during a 15-year period.

Authors:  Pamela M McMahon; Chung Yin Kong; Milton C Weinstein; Angela C Tramontano; Lauren E Cipriano; Bruce E Johnson; Jane C Weeks; G Scott Gazelle
Journal:  Cancer       Date:  2008-12-15       Impact factor: 6.860

8.  Cigarette smoking and changes in the histopathology of lung cancer.

Authors:  M J Thun; C A Lally; J T Flannery; E E Calle; W D Flanders; C W Heath
Journal:  J Natl Cancer Inst       Date:  1997-11-05       Impact factor: 13.506

Review 9.  Classification, staging and prognosis of lung cancer.

Authors:  C J Beadsmoore; N J Screaton
Journal:  Eur J Radiol       Date:  2003-01       Impact factor: 3.528

10.  Lung cancer pathology in smokers, ex-smokers and never smokers.

Authors:  J E Muscat; E L Wynder
Journal:  Cancer Lett       Date:  1995-01-06       Impact factor: 8.679

View more
  31 in total

1.  Calibrating models in economic evaluation: a seven-step approach.

Authors:  Tazio Vanni; Jonathan Karnon; Jason Madan; Richard G White; W John Edmunds; Anna M Foss; Rosa Legood
Journal:  Pharmacoeconomics       Date:  2011-01       Impact factor: 4.981

2.  Radiofrequency Ablation of Barrett's Esophagus Reduces Esophageal Adenocarcinoma Incidence and Mortality in a Comparative Modeling Analysis.

Authors:  Sonja Kroep; Curtis R Heberle; Kit Curtius; Chung Yin Kong; Iris Lansdorp-Vogelaar; Ayman Ali; W Asher Wolf; Nicholas J Shaheen; Stuart J Spechler; Joel H Rubenstein; Norman S Nishioka; Stephen J Meltzer; William D Hazelton; Marjolein van Ballegooijen; Angela C Tramontano; G Scott Gazelle; E Georg Luebeck; John M Inadomi; Chin Hur
Journal:  Clin Gastroenterol Hepatol       Date:  2017-01-12       Impact factor: 11.382

3.  Cost-effectiveness of breast MR imaging and screen-film mammography for screening BRCA1 gene mutation carriers.

Authors:  Janie M Lee; Pamela M McMahon; Chung Y Kong; Daniel B Kopans; Paula D Ryan; Elissa M Ozanne; Elkan F Halpern; G Scott Gazelle
Journal:  Radiology       Date:  2010-03       Impact factor: 11.105

Review 4.  Calibration methods used in cancer simulation models and suggested reporting guidelines.

Authors:  Natasha K Stout; Amy B Knudsen; Chung Yin Kong; Pamela M McMahon; G Scott Gazelle
Journal:  Pharmacoeconomics       Date:  2009       Impact factor: 4.981

5.  Performance of a mathematical model to forecast lives saved from HIV treatment expansion in resource-limited settings.

Authors:  April D Kimmel; Daniel W Fitzgerald; Jean W Pape; Bruce R Schackman
Journal:  Med Decis Making       Date:  2014-10-20       Impact factor: 2.583

6.  Bayesian Methods for Calibrating Health Policy Models: A Tutorial.

Authors:  Nicolas A Menzies; Djøra I Soeteman; Ankur Pandya; Jane J Kim
Journal:  Pharmacoeconomics       Date:  2017-06       Impact factor: 4.981

7.  Using Active Learning for Speeding up Calibration in Simulation Models.

Authors:  Mucahit Cevik; Mehmet Ali Ergun; Natasha K Stout; Amy Trentham-Dietz; Mark Craven; Oguzhan Alagoz
Journal:  Med Decis Making       Date:  2015-10-15       Impact factor: 2.583

8.  Multiobjective Calibration of Disease Simulation Models Using Gaussian Processes.

Authors:  Aditya Sai; Carolina Vivas-Valencia; Thomas F Imperiale; Nan Kong
Journal:  Med Decis Making       Date:  2019-08-02       Impact factor: 2.583

9.  Chapter 9: The MGH-HMS lung cancer policy model: tobacco control versus screening.

Authors:  Pamela M McMahon; Chung Yin Kong; Bruce E Johnson; Milton C Weinstein; Jane C Weeks; Angela C Tramontano; Lauren E Cipriano; Colleen Bouzan; G Scott Gazelle
Journal:  Risk Anal       Date:  2012-07       Impact factor: 4.000

10.  Chapter 13: CISNET lung models: comparison of model assumptions and model structures.

Authors:  Pamela M McMahon; William D Hazelton; Marek Kimmel; Lauren D Clarke
Journal:  Risk Anal       Date:  2012-07       Impact factor: 4.000

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.