Literature DB >> 19896542

Local white matter geometry from diffusion tensor gradients.

Peter Savadjiev1, Gordon L Kindlmann, Sylvain Bouix, Martha E Shenton, Carl-Fredrik Westin.   

Abstract

We introduce a mathematical framework for computing geometrical properties of white matter fibers directly from diffusion tensor fields. The key idea is to isolate the portion of the gradient of the tensor field corresponding to local variation in tensor orientation, and to project it onto a coordinate frame of tensor eigenvectors. The resulting eigenframe-centered representation then makes it possible to define scalar indices (or measures) that describe the local white matter geometry directly from the diffusion tensor field and its gradient, without requiring prior tractography. We derive new scalar indices of (1) fiber dispersion and (2) fiber curving, and we demonstrate them on synthetic and in vivo data. Finally, we illustrate their applicability to a group study on schizophrenia. Copyright 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19896542      PMCID: PMC2818447          DOI: 10.1016/j.neuroimage.2009.10.073

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  27 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

2.  Log-Euclidean metrics for fast and simple calculus on diffusion tensors.

Authors:  Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache
Journal:  Magn Reson Med       Date:  2006-08       Impact factor: 4.668

3.  DTI segmentation by statistical surface evolution.

Authors:  Christophe Lenglet; Mikaël Rousson; Rachid Deriche
Journal:  IEEE Trans Med Imaging       Date:  2006-06       Impact factor: 10.048

4.  Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.

Authors:  Isabelle Corouge; P Thomas Fletcher; Sarang Joshi; Sylvain Gouttard; Guido Gerig
Journal:  Med Image Anal       Date:  2006-08-22       Impact factor: 8.545

5.  Diffusion tensor analysis with invariant gradients and rotation tangents.

Authors:  Gordon Kindlmann; Daniel B Ennis; Ross T Whitaker; Carl-Fredrik Westin
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

6.  Tensor splines for interpolation and approximation of DT-MRI with applications to segmentation of isolated rat hippocampi.

Authors:  Angelos Barmpoutis; Baba C Vemuri; Timothy M Shepherd; John R Forder
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

7.  Labeling of ambiguous subvoxel fibre bundle configurations in high angular resolution diffusion MRI.

Authors:  Peter Savadjiev; Jennifer S W Campbell; Maxime Descoteaux; Rachid Deriche; G Bruce Pike; Kaleem Siddiqi
Journal:  Neuroimage       Date:  2008-02-01       Impact factor: 6.556

Review 8.  A review of diffusion tensor imaging studies in schizophrenia.

Authors:  Marek Kubicki; Robert McCarley; Carl-Fredrik Westin; Hae-Jeong Park; Stephan Maier; Ron Kikinis; Ferenc A Jolesz; Martha E Shenton
Journal:  J Psychiatr Res       Date:  2005-07-14       Impact factor: 4.791

Review 9.  Diffusion tensor MRI in multiple sclerosis.

Authors:  Marco Rovaris; Massimo Filippi
Journal:  J Neuroimaging       Date:  2007-04       Impact factor: 2.486

10.  Automatic tractography segmentation using a high-dimensional white matter atlas.

Authors:  Lauren J O'Donnell; Carl-Fredrik Westin
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

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  12 in total

1.  Fiber geometry in the corpus callosum in schizophrenia: evidence for transcallosal misconnection.

Authors:  Thomas J Whitford; Peter Savadjiev; Marek Kubicki; Lauren J O'Donnell; Douglas P Terry; Sylvain Bouix; Carl-Fredrik Westin; Jason S Schneiderman; Laurel Bobrow; Andrew C Rausch; Margaret Niznikiewicz; Paul G Nestor; Christos Pantelis; Stephen J Wood; Robert W McCarley; Martha E Shenton
Journal:  Schizophr Res       Date:  2011-08-09       Impact factor: 4.939

2.  Sexual dimorphic abnormalities in white matter geometry common to schizophrenia and non-psychotic high-risk subjects: Evidence for a neurodevelopmental risk marker?

Authors:  Peter Savadjiev; Larry J Seidman; Heidi Thermenos; Matcheri Keshavan; Susan Whitfield-Gabrieli; Tim J Crow; Marek Kubicki
Journal:  Hum Brain Mapp       Date:  2015-10-15       Impact factor: 5.038

3.  Ball and rackets: Inferring fiber fanning from diffusion-weighted MRI.

Authors:  Stamatios N Sotiropoulos; Timothy E J Behrens; Saad Jbabdi
Journal:  Neuroimage       Date:  2012-01-14       Impact factor: 6.556

4.  Fusion of white and gray matter geometry: a framework for investigating brain development.

Authors:  Peter Savadjiev; Yogesh Rathi; Sylvain Bouix; Alex R Smith; Robert T Schultz; Ragini Verma; Carl-Fredrik Westin
Journal:  Med Image Anal       Date:  2014-07-08       Impact factor: 8.545

5.  Can increased spatial resolution solve the crossing fiber problem for diffusion MRI?

Authors:  Kurt Schilling; Yurui Gao; Vaibhav Janve; Iwona Stepniewska; Bennett A Landman; Adam W Anderson
Journal:  NMR Biomed       Date:  2017-09-15       Impact factor: 4.044

6.  Diffusion based abnormality markers of pathology: toward learned diagnostic prediction of ASD.

Authors:  Madhura Ingalhalikar; Drew Parker; Luke Bloy; Timothy P L Roberts; Ragini Verma
Journal:  Neuroimage       Date:  2011-05-14       Impact factor: 6.556

Review 7.  An introduction to diffusion tensor image analysis.

Authors:  Lauren J O'Donnell; Carl-Fredrik Westin
Journal:  Neurosurg Clin N Am       Date:  2011-04       Impact factor: 2.509

8.  Multi-scale characterization of white matter tract geometry.

Authors:  Peter Savadjiev; Yogesh Rathi; Sylvain Bouix; Ragini Verma; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

9.  Sexually dimorphic white matter geometry abnormalities in adolescent onset schizophrenia.

Authors:  P Savadjiev; T J Whitford; M E Hough; C Clemm von Hohenberg; S Bouix; C-F Westin; M E Shenton; T J Crow; A C James; M Kubicki
Journal:  Cereb Cortex       Date:  2013-01-10       Impact factor: 5.357

10.  Joint Multi-Fiber NODDI Parameter Estimation and Tractography Using the Unscented Information Filter.

Authors:  Chinthala P Reddy; Yogesh Rathi
Journal:  Front Neurosci       Date:  2016-04-20       Impact factor: 4.677

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