Literature DB >> 1988441

Monomer-tetramer equilibrium of the Escherichia coli ssb-1 mutant single strand binding protein.

W Bujalowski1, T M Lohman.   

Abstract

The Escherichia coli single strand binding (SSB) protein is an essential protein required for DNA replication and involved in recombination and a number of repair processes. It is a stable homotetramer in solution; however the ssb-1 mutation (His-55 to Tyr) destabilizes the tetramer with respect to monomers and this defect seems to explain the observed phenotype (Williams, K. R., Murphy, J. B., and Chase, J. W. (1984) J. Biol. Chem. 259, 11804-11811). We report a quantitative study of the SSB-1 monomer-tetramer equilibrium in vitro as a function of temperature, pH, NaCl, MgCl2, urea, and guanidine hydrochloride concentrations. The self-assembly equilibrium was monitored by the increase in intrinsic protein fluorescence anisotropy accompanying the formation of the tetramer. The experimental isotherms indicate that SSB-1 dimers are not highly populated at equilibrium, hence the formation of the tetramer is well-described as a one-step association of four monomers. At 25 degrees C, pH 8.1, the monomer concentration for 50% tetramer dissociation is (MT)1/2 = 0.87 microM, corresponding to a monomer-tetramer equilibrium constant, KT = 3 +/- 1 x 10(18) M-3. The tetramerization constant, KT, is highly dependent upon temperature and pH, with delta H0 = -51 +/- 7 kcal/mol (pH 8.1) and delta H0 = -37 +/- 5 kcal/mol (pH 6.9). There is no effect of NaCl on the monomer-tetramer association in the range from 0.20 to 1.0 M; however, MgCl2 decreases the stability of the SSB-1 tetramer. In the presence of high concentrations of the single-stranded oligonucleotide, dT(pT)15, the tetramerization constant is slightly increased indicating that binding of the oligonucleotide to the SSB-1 monomer promotes the assembly process, although not dramatically. The large negative delta H0 that is associated with formation of the tetramer provides a likely explanation for the temperature sensitivity of the ssb-1 mutation.

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Year:  1991        PMID: 1988441

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  The macroscopic rate of nucleic acid translocation by hepatitis C virus helicase NS3h is dependent on both sugar and base moieties.

Authors:  Ali R Khaki; Cassandra Field; Shuja Malik; Anita Niedziela-Majka; Stephanie A Leavitt; Ruth Wang; Magdeleine Hung; Roman Sakowicz; Katherine M Brendza; Christopher J Fischer
Journal:  J Mol Biol       Date:  2010-05-06       Impact factor: 5.469

2.  E. coli SSB tetramer binds the first and second molecules of (dT)(35) with heat capacities of opposite sign.

Authors:  Alexander G Kozlov; Timothy M Lohman
Journal:  Biophys Chem       Date:  2011-05-12       Impact factor: 2.352

3.  Reduced stimulation of recombinant DNA polymerase γ and mitochondrial DNA (mtDNA) helicase by variants of mitochondrial single-stranded DNA-binding protein (mtSSB) correlates with defects in mtDNA replication in animal cells.

Authors:  Marcos T Oliveira; Laurie S Kaguni
Journal:  J Biol Chem       Date:  2011-09-26       Impact factor: 5.157

4.  Thermodynamic Interrogation of the Assembly of a Viral Genome Packaging Motor Complex.

Authors:  Teng-Chieh Yang; David Ortiz; Lyn'Al Nosaka; Gabriel C Lander; Carlos Enrique Catalano
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

5.  Effects of monovalent anions on a temperature-dependent heat capacity change for Escherichia coli SSB tetramer binding to single-stranded DNA.

Authors:  Alexander G Kozlov; Timothy M Lohman
Journal:  Biochemistry       Date:  2006-04-25       Impact factor: 3.162

Review 6.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

7.  Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution.

Authors:  S Raghunathan; C S Ricard; T M Lohman; G Waksman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

8.  Mechanism of interaction between single-stranded DNA binding protein and DNA.

Authors:  Simone Kunzelmann; Caroline Morris; Alap P Chavda; John F Eccleston; Martin R Webb
Journal:  Biochemistry       Date:  2010-02-09       Impact factor: 3.162

9.  Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA.

Authors:  Alexander G Kozlov; Elizabeth Weiland; Anuradha Mittal; Vince Waldman; Edwin Antony; Nicole Fazio; Rohit V Pappu; Timothy M Lohman
Journal:  J Mol Biol       Date:  2015-01-03       Impact factor: 5.469

10.  Escherichia coli single-stranded DNA-binding protein: nanoESI-MS studies of salt-modulated subunit exchange and DNA binding transactions.

Authors:  Claire E Mason; Slobodan Jergic; Allen T Y Lo; Yao Wang; Nicholas E Dixon; Jennifer L Beck
Journal:  J Am Soc Mass Spectrom       Date:  2013-01-03       Impact factor: 3.109

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