Literature DB >> 1988027

The tyrosine-225 to phenylalanine mutation of Escherichia coli aspartate aminotransferase results in an alkaline transition in the spectrophotometric and kinetic pKa values and reduced values of both kcat and Km.

J M Goldberg1, R V Swanson, H S Goodman, J F Kirsch.   

Abstract

Tyrosine-225 is hydrogen-bonded to the 3'-hydroxyl group of pyridoxal 5'-phosphate in the active site of aspartate aminotransferase. Replacement of this residue with phenylalanine (Y225F) results in a shift in the acidic limb of the pKa of the kcat/KAsp vs pH profile from 7.1 (wild-type) to 8.4 (mutant). The change in the kinetic pKa is mirrored by a similar shift in the spectrophotometrically determined pKa of the protonated internal aldimine. Thus, a major role of tyrosine-225 is to provide a hydrogen bond that stabilizes the reactive unprotonated form of the internal aldimine in the neutral pH range. The Km value for L-aspartate and the dissociation constant for alpha-methyl-DL-aspartate are respectively 20- and 37-fold lower in the mutant than in the wild-type enzyme, while the dissociation constant for maleate is much less perturbed. These results are interpreted in terms of competition between the Tyr225 hydroxyl group and the substrate or quasi-substrate amino group for the coenzyme. The value of kcat in Y225F is 450-fold less than the corresponding rate constant in wild type. The increased affinity of the mutant enzyme for substrates, combined with the lack of discrimination against deuterium in the C alpha position of L-aspartate in Y225F-catalyzed transamination [Kirsch, J. F., Toney, M. D., & Goldberg, J. M. (1990) in Protein and Pharmaceutical Engineering (Craik, C. S., Fletterick, R., Matthews, C. R., & Wells, J., Eds.) pp 105-118, Wiley-Liss, New York], suggests that the rate-determining step in the mutant is hydrolysis of the ketimine intermediate rather than C alpha-H abstraction which is partially rate-determining in wild type.

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Year:  1991        PMID: 1988027     DOI: 10.1021/bi00215a041

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

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2.  The structure of serine hydroxymethyltransferase as modeled by homology and validated by site-directed mutagenesis.

Authors:  S Pascarella; S Angelaccio; R Contestabile; S Delle Fratte; M Di Salvo; F Bossa
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3.  Crystal structure of Escherichia coli cystathionine gamma-synthase at 1.5 A resolution.

Authors:  T Clausen; R Huber; L Prade; M C Wahl; A Messerschmidt
Journal:  EMBO J       Date:  1998-12-01       Impact factor: 11.598

Review 4.  PLP-dependent H(2)S biogenesis.

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5.  Functional evolution of PLP-dependent enzymes based on active-site structural similarities.

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6.  Chloroplastic aspartate aminotransferase from Arabidopsis thaliana: an examination of the relationship between the structure of the gene and the spatial structure of the protein.

Authors:  S E Wilkie; R Lambert; M J Warren
Journal:  Biochem J       Date:  1996-11-01       Impact factor: 3.857

7.  Expression of apple 1-aminocyclopropane-1-carboxylate synthase in Escherichia coli: kinetic characterization of wild-type and active-site mutant forms.

Authors:  M F White; J Vasquez; S F Yang; J F Kirsch
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8.  Reactions of glutamate semialdehyde aminotransferase (glutamate-1-semialdehyde 2,1 aminomutase) with vinyl and acetylenic substrate analogues analysed by rapid scanning spectrophotometry.

Authors:  R J Tyacke; R Contestabile; B Grimm; J L Harwood; R A John
Journal:  Biochem J       Date:  1995-07-01       Impact factor: 3.857

9.  Brønsted analysis of aspartate aminotransferase via exogenous catalysis of reactions of an inactive mutant.

Authors:  M D Toney; J F Kirsch
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

10.  Quantitative chimeric analysis of six specificity determinants that differentiate Escherichia coli aspartate from tyrosine aminotransferase.

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Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

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