Literature DB >> 25644701

Complex formation of RNA silencing proteins in the perinuclear region of Neurospora crassa.

Logan M Decker1, Erin C Boone1, Hua Xiao1, Benjamin S Shanker1, Shannon F Boone1, Shanika L Kingston2, Seung A Lee1, Thomas M Hammond3, Patrick K T Shiu4.   

Abstract

In Neurospora, genes not paired during meiosis are targeted by meiotic silencing by unpaired DNA (MSUD). Here, our bimolecular fluorescence complementation (BiFC) study suggests that RNA-directed RNA polymerase, Dicer, Argonaute, and others form a silencing complex in the perinuclear region, with intimate interactions among the majority of them. We have also shown that SAD-2 is likely the anchor for this assembly.
Copyright © 2015 by the Genetics Society of America.

Entities:  

Keywords:  Neurospora crassa; RNA interference; bimolecular fluorescence complementation (BiFC); fluorescent protein tagging; meiotic silencing by unpaired DNA (MSUD)

Mesh：

Substances：

Year:  2015        PMID： 25644701      PMCID： PMC4391574          DOI： 10.1534/genetics.115.174623

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  28 in total

1.  Quelling: transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences.

Authors:  N Romano; G Macino
Journal:  Mol Microbiol       Date:  1992-11       Impact factor: 3.501

2.  Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

Authors:  Mohammad R Motamedi; André Verdel; Serafin U Colmenares; Scott A Gerber; Steven P Gygi; Danesh Moazed
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

3.  A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors.

Authors:  Hildur V Colot; Gyungsoon Park; Gloria E Turner; Carol Ringelberg; Christopher M Crew; Liubov Litvinkova; Richard L Weiss; Katherine A Borkovich; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

4.  Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways.

Authors:  Thomas F Duchaine; James A Wohlschlegel; Scott Kennedy; Yanxia Bei; Darryl Conte; Kaming Pang; Daniel R Brownell; Sandra Harding; Shohei Mitani; Gary Ruvkun; John R Yates; Craig C Mello
Journal:  Cell       Date:  2006-01-27       Impact factor: 41.582

Review 5.  P granule assembly and function in Caenorhabditis elegans germ cells.

Authors:  Dustin Updike; Susan Strome
Journal:  J Androl       Date:  2009-10-29

Review 6.  Chromatoid body and small RNAs in male germ cells.

Authors:  Oliver Meikar; Matteo Da Ros; Hanna Korhonen; Noora Kotaja
Journal:  Reproduction       Date:  2011-06-07       Impact factor: 3.906

7.  Repeat-induced G-C to A-T mutations in Neurospora.

Authors:  E B Cambareri; B C Jensen; E Schabtach; E U Selker
Journal:  Science       Date:  1989-06-30       Impact factor: 47.728

8.  SAD-2 is required for meiotic silencing by unpaired DNA and perinuclear localization of SAD-1 RNA-directed RNA polymerase.

Authors:  Patrick K T Shiu; Denise Zickler; Namboori B Raju; Gwenael Ruprich-Robert; Robert L Metzenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-06       Impact factor: 11.205

9.  Physical and functional coupling of RNA-dependent RNA polymerase and Dicer in the biogenesis of endogenous siRNAs.

Authors:  Suzanne R Lee; Kathleen Collins
Journal:  Nat Struct Mol Biol       Date:  2007-07-01       Impact factor: 15.369

10.  SAD-3, a Putative Helicase Required for Meiotic Silencing by Unpaired DNA, Interacts with Other Components of the Silencing Machinery.

Authors:  Thomas M Hammond; Hua Xiao; Erin C Boone; Tony D Perdue; Patricia J Pukkila; Patrick K T Shiu
Journal:  G3 (Bethesda)       Date:  2011-10-01       Impact factor: 3.154
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  10 in total

Review 1.  Repeat-Induced Point Mutation and Other Genome Defense Mechanisms in Fungi.

Authors:  Eugene Gladyshev
Journal:  Microbiol Spectr       Date:  2017-07

2.  Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon.

Authors:  Yizhou Wang; Kristina M Smith; John W Taylor; Michael Freitag; Jason E Stajich
Journal:  G3 (Bethesda)       Date:  2015-06-23       Impact factor: 3.154

3.  An RNA Recognition Motif-Containing Protein Functions in Meiotic Silencing by Unpaired DNA.

Authors:  Dilini A Samarajeewa; Pennapa Manitchotpisit; Miranda Henderson; Hua Xiao; David G Rehard; Kevin A Edwards; Patrick K T Shiu; Thomas M Hammond
Journal:  G3 (Bethesda)       Date:  2017-08-07       Impact factor: 3.154

4.  The Nuclear Cap-Binding Complex Mediates Meiotic Silencing by Unpaired DNA.

Authors:  Logan M Decker; Hua Xiao; Erin C Boone; Michael M Vierling; Benjamin S Shanker; Shanika L Kingston; Shannon F Boone; Jackson B Haynes; Patrick K T Shiu
Journal:  G3 (Bethesda)       Date:  2017-04-03       Impact factor: 3.154

5.  Genome-wide exonic small interference RNA-mediated gene silencing regulates sexual reproduction in the homothallic fungus Fusarium graminearum.

Authors:  Hokyoung Son; Ae Ran Park; Jae Yun Lim; Chanseok Shin; Yin-Won Lee
Journal:  PLoS Genet       Date:  2017-02-01       Impact factor: 5.917

6.  Suppressors of Meiotic Silencing by Unpaired DNA.

Authors:  Hua Xiao; Thomas M Hammond; Patrick K T Shiu
Journal:  Noncoding RNA       Date:  2019-01-28

7.  Functional Characterization of Entamoeba histolytica Argonaute Proteins Reveals a Repetitive DR-Rich Motif Region That Controls Nuclear Localization.

Authors:  Hanbang Zhang; Vy Tran; Dipak Manna; Gretchen Ehrenkaufer; Upinder Singh
Journal:  mSphere       Date:  2019-10-16       Impact factor: 4.389

Review 8.  The Evolutionary Significance of RNAi in the Fungal Kingdom.

Authors:  Carlos Lax; Ghizlane Tahiri; José Alberto Patiño-Medina; José T Cánovas-Márquez; José A Pérez-Ruiz; Macario Osorio-Concepción; Eusebio Navarro; Silvia Calo
Journal:  Int J Mol Sci       Date:  2020-12-08       Impact factor: 5.923

9.  FoQDE2-dependent milRNA promotes Fusarium oxysporum f. sp. cubense virulence by silencing a glycosyl hydrolase coding gene expression.

Authors:  Minhui Li; Lifei Xie; Meng Wang; Yilian Lin; Jiaqi Zhong; Yong Zhang; Jing Zeng; Guanghui Kong; Pinggen Xi; Huaping Li; Li-Jun Ma; Zide Jiang
Journal:  PLoS Pathog       Date:  2022-05-05       Impact factor: 6.823

10.  An NCBP3-Domain Protein Mediates Meiotic Silencing by Unpaired DNA.

Authors:  Erin C Boone; Hua Xiao; Michael M Vierling; Logan M Decker; Victor T Sy; Rana F Kennedy; Marilyn A Bonham; Shannon F Schmitz; Annie M John; Thomas M Hammond; Patrick K T Shiu
Journal:  G3 (Bethesda)       Date:  2020-06-01       Impact factor: 3.154
  10 in total

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