Literature DB >> 19861605

Malaria diagnosis by a polymerase chain reaction-based assay using a pooling strategy.

Ajay R Bharti1, Scott L Letendre, Kailash P Patra, Joseph M Vinetz, Davey M Smith.   

Abstract

Pooling clinical specimens reduces the number of assays needed when screening for infectious diseases. Polymerase chain reaction (PCR)-based assays are the most sensitive tests to diagnose malaria, but its high cost limits its use. We adapted a pooling platform that could reduce the number of assays needed to detect malaria infection. To evaluate this platform, two sets of 100 serum samples, with 1% and 5% malaria prevalence, were tested. DNA, extracted from pooled samples, was amplified by malaria-specific PCR. Additional validation was performed by determining the level of PCR detection based on 1:10 and 1:100 dilution. The platform correctly detected all malaria samples in the two test matrices. The use of stored serum samples also has important implications for studies investigating malaria prevalence rates retrospectively. Field studies, using serum and whole blood specimens, are needed to validate this technique for the adaptation of these methods for clinical utility.

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Year:  2009        PMID: 19861605      PMCID: PMC2770880          DOI: 10.4269/ajtmh.2009.09-0274

Source DB:  PubMed          Journal:  Am J Trop Med Hyg        ISSN: 0002-9637            Impact factor:   2.345


  18 in total

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Review 2.  ACP Broadsheet no 148. July 1996. Laboratory diagnosis of malaria.

Authors:  D C Warhurst; J E Williams
Journal:  J Clin Pathol       Date:  1996-07       Impact factor: 3.411

3.  High sensitivity of detection of human malaria parasites by the use of nested polymerase chain reaction.

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4.  The use of a square array scheme in blood testing.

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5.  Accuracy of routine laboratory diagnosis of malaria in the United Kingdom.

Authors:  L M Milne; M S Kyi; P L Chiodini; D C Warhurst
Journal:  J Clin Pathol       Date:  1994-08       Impact factor: 3.411

6.  Detection of Plasmodium falciparum DNA in plasma.

Authors:  S Gal; C Fidler; S Turner; Y M Lo; D J Roberts; J S Wainscoat
Journal:  Ann N Y Acad Sci       Date:  2001-09       Impact factor: 5.691

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Journal:  Am J Trop Med Hyg       Date:  2003-07       Impact factor: 2.345

9.  High throughput screening of 16 million serologically negative blood donors for hepatitis B virus, hepatitis C virus and human immunodeficiency virus type-1 by nucleic acid amplification testing with specific and sensitive multiplex reagent in Japan.

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  21 in total

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Journal:  J Clin Microbiol       Date:  2010-08-04       Impact factor: 5.948

2.  Occult HBV infection in HIV-infected adults and evaluation of pooled NAT for HBV.

Authors:  T R Dinesha; J Boobalan; S Sivamalar; D Subashini; S S Solomon; K G Murugavel; P Balakrishnan; D M Smith; S Saravanan
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3.  Cost-effective pooling of DNA from nasopharyngeal swab samples for large-scale detection of bacteria by real-time PCR.

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4.  Pooled exposure assessment for matched case-control studies.

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5.  Molecular Testing for Plasmodium falciparum by Use of Serum or Plasma and Comparison with Microscopy and Rapid Diagnostic Testing in Febrile Nigerian Patients.

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6.  Detection of rat lungworm in intermediate, definitive, and paratenic hosts obtained from environmental sources.

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Review 7.  Malaria diagnostics in clinical trials.

Authors:  Sean C Murphy; Joseph P Shott; Sunil Parikh; Paige Etter; William R Prescott; V Ann Stewart
Journal:  Am J Trop Med Hyg       Date:  2013-09-23       Impact factor: 2.345

8.  A direct comparison of real time PCR on plasma and blood to detect Plasmodium falciparum infection in children.

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9.  Correlates of HIV and malaria co-infection in Southern India.

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10.  Use of rapid diagnostic tests in malaria school surveys in Kenya: does their under-performance matter for planning malaria control?

Authors:  Caroline W Gitonga; Jimmy H Kihara; Sammy M Njenga; Ken Awuondo; Abdisalan M Noor; Robert W Snow; Simon J Brooker
Journal:  Am J Trop Med Hyg       Date:  2012-10-22       Impact factor: 2.345

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