Literature DB >> 19855050

ARABIDOPSIS TRITHORAX-RELATED7 is required for methylation of lysine 4 of histone H3 and for transcriptional activation of FLOWERING LOCUS C.

Yosuke Tamada1, Jae-Young Yun, Seung Chul Woo, Richard M Amasino.   

Abstract

In the winter-annual accessions of Arabidopsis thaliana, presence of an active allele of FRIGIDA (FRI) elevates expression of FLOWERING LOCUS C (FLC), a repressor of flowering, and thus confers a vernalization requirement. FLC activation by FRI involves methylation of Lys 4 of histone H3 (H3K4) at FLC chromatin. Many multicellular organisms that have been examined contain two classes of H3K4 methylases, a yeast (Saccharomyces cerevisiae) Set1 class and a class related to Drosophila melanogaster Trithorax. In this work, we demonstrate that ARABIDOPSIS TRITHORAX-RELATED7 (ATXR7), a putative Set1 class H3K4 methylase, is required for proper FLC expression. The atxr7 mutation partially suppresses the delayed flowering of a FRI-containing line. The rapid flowering of atxr7 is associated with reduced FLC expression and is accompanied by decreased H3K4 methylation and increased H3K27 methylation at FLC. Thus, ATXR7 is required for the proper levels of these histone modifications that set the level of FLC expression to create a vernalization requirement in winter-annual accessions. Previously, it has been reported that lesions in ATX1, which encodes a Trithorax class H3K4 methylase, partially suppress the delayed flowering of winter-annual Arabidopsis. We show that the flowering phenotype of atx1 atxr7 double mutants is additive relative to those of single mutants. Therefore, both classes of H3K4 methylases appear to be required for proper regulation of FLC expression.

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Year:  2009        PMID: 19855050      PMCID: PMC2782277          DOI: 10.1105/tpc.109.070060

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  74 in total

1.  Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

Authors:  U Johanson; J West; C Lister; S Michaels; R Amasino; C Dean
Journal:  Science       Date:  2000-10-13       Impact factor: 47.728

2.  Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity.

Authors:  Huck Hui Ng; François Robert; Richard A Young; Kevin Struhl
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

3.  CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis.

Authors:  P Suárez-López; K Wheatley; F Robson; H Onouchi; F Valverde; G Coupland
Journal:  Nature       Date:  2001-04-26       Impact factor: 49.962

4.  Genetic interactions of the Arabidopsis flowering time gene FCA, with genes regulating floral initiation.

Authors:  T Page; R Macknight; C H Yang; C Dean
Journal:  Plant J       Date:  1999-02       Impact factor: 6.417

5.  The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors:  C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

6.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

7.  EARLY IN SHORT DAYS 1 (ESD1) encodes ACTIN-RELATED PROTEIN 6 (AtARP6), a putative component of chromatin remodelling complexes that positively regulates FLC accumulation in Arabidopsis.

Authors:  Mar Martin-Trillo; Ana Lázaro; R Scott Poethig; Concepción Gómez-Mena; Manuel A Piñeiro; Jose M Martinez-Zapater; Jose A Jarillo
Journal:  Development       Date:  2006-02-22       Impact factor: 6.868

8.  Resetting and regulation of Flowering Locus C expression during Arabidopsis reproductive development.

Authors:  Jean Choi; Youbong Hyun; Min-Jeong Kang; Hye In Yun; Jae-Young Yun; Clare Lister; Caroline Dean; Richard M Amasino; Bosl Noh; Yoo-Sun Noh; Yeonhee Choi
Journal:  Plant J       Date:  2009-01-17       Impact factor: 6.417

9.  The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions.

Authors:  Abdelaty Saleh; Raul Alvarez-Venegas; Mehtap Yilmaz; Oahn Le; Guichuan Hou; Monther Sadder; Ayed Al-Abdallat; Yuannan Xia; Guoqinq Lu; Istvan Ladunga; Zoya Avramova
Journal:  Plant Cell       Date:  2008-03-28       Impact factor: 11.277

10.  ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing.

Authors:  Yannick Jacob; Suhua Feng; Chantal A LeBlanc; Yana V Bernatavichute; Hume Stroud; Shawn Cokus; Lianna M Johnson; Matteo Pellegrini; Steven E Jacobsen; Scott D Michaels
Journal:  Nat Struct Mol Biol       Date:  2009-06-07       Impact factor: 15.369

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  75 in total

Review 1.  Polycomb group complexes mediate developmental transitions in plants.

Authors:  Sarah Holec; Frédéric Berger
Journal:  Plant Physiol       Date:  2011-11-15       Impact factor: 8.340

2.  Regulation by polycomb and trithorax group proteins in Arabidopsis.

Authors:  Raúl Alvarez-Venegas
Journal:  Arabidopsis Book       Date:  2010-05-08

3.  Growth habit determination by the balance of histone methylation activities in Arabidopsis.

Authors:  Jong-Hyun Ko; Irina Mitina; Yosuke Tamada; Youbong Hyun; Yeonhee Choi; Richard M Amasino; Bosl Noh; Yoo-Sun Noh
Journal:  EMBO J       Date:  2010-08-13       Impact factor: 11.598

Review 4.  Regulation of transcription in plants: mechanisms controlling developmental switches.

Authors:  Kerstin Kaufmann; Alice Pajoro; Gerco C Angenent
Journal:  Nat Rev Genet       Date:  2010-11-10       Impact factor: 53.242

5.  Arabidopsis SET DOMAIN GROUP2 is required for H3K4 trimethylation and is crucial for both sporophyte and gametophyte development.

Authors:  Alexandre Berr; Emily J McCallum; Rozenn Ménard; Denise Meyer; Jörg Fuchs; Aiwu Dong; Wen-Hui Shen
Journal:  Plant Cell       Date:  2010-10-29       Impact factor: 11.277

6.  Overexpression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis.

Authors:  Hongchun Yang; Huixian Mo; Di Fan; Ying Cao; Sujuan Cui; Ligeng Ma
Journal:  Plant Cell Rep       Date:  2012-05-04       Impact factor: 4.570

7.  Vernalization-mediated VIN3 Induction Overcomes the LIKE-HETEROCHROMATIN PROTEIN1/POLYCOMB REPRESSION COMPLEX2-mediated epigenetic repression.

Authors:  Dong-Hwan Kim; Brett R Zografos; Sibum Sung
Journal:  Plant Physiol       Date:  2010-07-29       Impact factor: 8.340

8.  Phosphorylation of SPT5 by CDKD;2 Is Required for VIP5 Recruitment and Normal Flowering in Arabidopsis thaliana.

Authors:  Chengyuan Lu; Yongke Tian; Shiliang Wang; Yanhua Su; Ting Mao; Tongtong Huang; Qingqing Chen; Zuntao Xu; Yong Ding
Journal:  Plant Cell       Date:  2017-02-10       Impact factor: 11.277

9.  Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana.

Authors:  Jae-Young Yun; Yosuke Tamada; Ye Eun Kang; Richard M Amasino
Journal:  Plant Cell Physiol       Date:  2012-02-28       Impact factor: 4.927

10.  Genetic and epigenetic mechanisms underlying vernalization.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Arabidopsis Book       Date:  2014-02-12
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