Literature DB >> 19854082

DNP enhanced frequency-selective TEDOR experiments in bacteriorhodopsin.

Vikram S Bajaj1, Melody L Mak-Jurkauskas, Marina Belenky, Judith Herzfeld, Robert G Griffin.   

Abstract

We describe a new approach to multiple (13)C-(15)N distance measurements in uniformly labeled solids, frequency-selective (FS) TEDOR. The method shares features with FS-REDOR and ZF- and BASE-TEDOR, which also provide quantitative (15)N-(13)C spectral assignments and distance measurements in U-[(13)C,(15)N] samples. To demonstrate the validity of the FS-TEDOR sequence, we measured distances in [U-(13)C,(15)N]-asparagine which are in good agreement with other methods. In addition, we integrate high frequency dynamic nuclear polarization (DNP) into the experimental protocol and use FS-TEDOR to record a resolved correlation spectrum of the Arg-(13)C(gamma)-(15)N(epsilon) region in [U-(13)C,(15)N]-bacteriorhodopsin. We resolve six of the seven cross-peaks expected based on the primary sequence of this membrane protein. Copyright 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19854082      PMCID: PMC2818331          DOI: 10.1016/j.jmr.2009.09.005

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  36 in total

Review 1.  NMR probes of vectoriality in the proton-motive photocycle of bacteriorhodopsin: evidence for an 'electrostatic steering' mechanism.

Authors:  J Herzfeld; B Tounge
Journal:  Biochim Biophys Acta       Date:  2000-08-30

2.  High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Vikram S Bajaj; Michael T McMahon; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

3.  Dynamic nuclear polarization with biradicals.

Authors:  Kan-Nian Hu; Hsiao-hua Yu; Timothy M Swager; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2004-09-08       Impact factor: 15.419

4.  Proton assisted insensitive nuclei cross polarization.

Authors:  Józef R Lewandowski; Gaël De Paëpe; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2007-01-31       Impact factor: 15.419

5.  Continuous-Wave Operation of a 460-GHz Second Harmonic Gyrotron Oscillator.

Authors:  Melissa K Hornstein; Vikram S Bajaj; Robert G Griffin; Richard J Temkin
Journal:  IEEE Trans Plasma Sci IEEE Nucl Plasma Sci Soc       Date:  2006-06       Impact factor: 1.222

6.  Molecular conformation of a peptide fragment of transthyretin in an amyloid fibril.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Nathan S Astrof; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

7.  Dynamic nuclear polarization of amyloidogenic peptide nanocrystals: GNNQQNY, a core segment of the yeast prion protein Sup35p.

Authors:  Patrick C A van der Wel; Kan-Nian Hu; Józef Lewandowski; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2006-08-23       Impact factor: 15.419

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Amino-acid selective experiments on uniformly 13C and 15N labeled proteins by MAS NMR: Filtering of lysines and arginines.

Authors:  Stefan Jehle; Kristina Rehbein; Anne Diehl; Barth-Jan van Rossum
Journal:  J Magn Reson       Date:  2006-09-20       Impact factor: 2.229

10.  Solid-state NMR study of amyloid nanocrystals and fibrils formed by the peptide GNNQQNY from yeast prion protein Sup35p.

Authors:  Patrick C A van der Wel; Józef R Lewandowski; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2007-03-31       Impact factor: 15.419

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  17 in total

1.  Accurate determination of interstrand distances and alignment in amyloid fibrils by magic angle spinning NMR.

Authors:  Marc A Caporini; Vikram S Bajaj; Mikhail Veshtort; Anthony Fitzpatrick; Cait E MacPhee; Michele Vendruscolo; Christopher M Dobson; Robert G Griffin
Journal:  J Phys Chem B       Date:  2010-10-28       Impact factor: 2.991

2.  Heteronuclear proton assisted recoupling.

Authors:  Gaël De Paëpe; Józef R Lewandowski; Antoine Loquet; Matt Eddy; Simon Megy; Anja Böckmann; Robert G Griffin
Journal:  J Chem Phys       Date:  2011-03-07       Impact factor: 3.488

3.  Efficient assignment and NMR analysis of an intact virus using sequential side-chain correlations and DNP sensitization.

Authors:  Ivan V Sergeyev; Boris Itin; Rivkah Rogawski; Loren A Day; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

Review 4.  New NMR tools for protein structure and function: Spin tags for dynamic nuclear polarization solid state NMR.

Authors:  Rivkah Rogawski; Ann E McDermott
Journal:  Arch Biochem Biophys       Date:  2017-06-13       Impact factor: 4.013

5.  Dynamic Nuclear Polarization Signal Enhancement with High-Affinity Biradical Tags.

Authors:  Rivkah Rogawski; Ivan V Sergeyev; Yongjun Li; M Francesca Ottaviani; Virginia Cornish; Ann E McDermott
Journal:  J Phys Chem B       Date:  2017-02-06       Impact factor: 2.991

6.  Simplified THz Instrumentation for High-Field DNP-NMR Spectroscopy.

Authors:  Thorsten Maly; Jagadishwar R Sirigiri
Journal:  Appl Magn Reson       Date:  2012-07-01       Impact factor: 0.831

Review 7.  Polarizing agents and mechanisms for high-field dynamic nuclear polarization of frozen dielectric solids.

Authors:  Kan-Nian Hu
Journal:  Solid State Nucl Magn Reson       Date:  2011-08-06       Impact factor: 2.293

8.  Solid effect dynamic nuclear polarization and polarization pathways.

Authors:  Albert A Smith; Björn Corzilius; Alexander B Barnes; Thorsten Maly; Robert G Griffin
Journal:  J Chem Phys       Date:  2012-01-07       Impact factor: 3.488

9.  Dynamic nuclear polarization study of inhibitor binding to the M2(18-60) proton transporter from influenza A.

Authors:  Loren B Andreas; Alexander B Barnes; Björn Corzilius; James J Chou; Eric A Miller; Marc Caporini; Melanie Rosay; Robert G Griffin
Journal:  Biochemistry       Date:  2013-04-10       Impact factor: 3.162

10.  Cellular solid-state NMR investigation of a membrane protein using dynamic nuclear polarization.

Authors:  Kazutoshi Yamamoto; Marc A Caporini; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta       Date:  2014-07-11
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