Literature DB >> 22428872

A high-throughput screen for the engineered production of β-lactam antibiotics.

Ryan M Phelan1, Benjamin J DiPardo, Craig A Townsend.   

Abstract

High-throughput screens and selections have had profound impact on our ability to engineer proteins possessing new, desired properties. These methods are especially useful when applied to the modification of existing enzymes to create natural and unnatural products. In an advance upon existing methods we developed a high-throughput, genetically regulated screen for the in vivo production of β-lactam antibiotics using a green fluorescent protein (gfp) reporter. This assay proved reliable and sensitive and presents a dynamic range under which a wide array of β-lactam architectural subclasses can be detected. Moreover, the graded response elicited in this assay can be used to rank mutant activity. The utility of this development was demonstrated in vivo and then applied to the first experimental investigation of a putative catalytic residue in carbapenem synthase (CarC). Information gained about the mutability of this residue defines one parameter for enzymatic activity and sets boundaries for future mechanistic and engineering efforts.

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Year:  2012        PMID: 22428872      PMCID: PMC3356498          DOI: 10.1021/cb200504g

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  33 in total

Review 1.  Towards new beta-lactam antibiotics.

Authors:  I Andersson; A C van Scheltinga; K Valegård
Journal:  Cell Mol Life Sci       Date:  2001-11       Impact factor: 9.261

2.  Biosynthesis of carbapenem antibiotics: new carbapenam substrates for carbapenem synthase (CarC).

Authors:  Mark C Sleeman; Paul Smith; Barrie Kellam; Siri Ram Chhabra; Barrie W Bycroft; Christopher J Schofield
Journal:  Chembiochem       Date:  2004-06-07       Impact factor: 3.164

3.  Rational design of a novel fluorescent biosensor for beta-lactam antibiotics from a class A beta-lactamase.

Authors:  Pak-Ho Chan; Hong-Bing Liu; Yu Wai Chen; Kwok-Chu Chan; Chun-Wai Tsang; Yun-Chung Leung; Kwok-Yin Wong
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

Review 4.  Combinatorial biosynthesis of reduced polyketides.

Authors:  Kira J Weissman; Peter F Leadlay
Journal:  Nat Rev Microbiol       Date:  2005-12       Impact factor: 60.633

5.  Examining reactivity and specificity of cytochrome c peroxidase by using combinatorial mutagenesis.

Authors:  Martin Wilming; André Iffland; Petra Tafelmeyer; Claudio Arrivoli; Christophe Saudan; Kai Johnsson
Journal:  Chembiochem       Date:  2002-11-04       Impact factor: 3.164

6.  Crystal structure of carbapenem synthase (CarC).

Authors:  Ian J Clifton; Linh X Doan; Mark C Sleeman; Maya Topf; Hikokazu Suzuki; Rupert C Wilmouth; Christopher J Schofield
Journal:  J Biol Chem       Date:  2003-02-28       Impact factor: 5.157

7.  Production of the antimalarial drug precursor artemisinic acid in engineered yeast.

Authors:  Dae-Kyun Ro; Eric M Paradise; Mario Ouellet; Karl J Fisher; Karyn L Newman; John M Ndungu; Kimberly A Ho; Rachel A Eachus; Timothy S Ham; James Kirby; Michelle C Y Chang; Sydnor T Withers; Yoichiro Shiba; Richmond Sarpong; Jay D Keasling
Journal:  Nature       Date:  2006-04-13       Impact factor: 49.962

8.  Carbapenem biosynthesis: confirmation of stereochemical assignments and the role of CarC in the ring stereoinversion process from L-proline.

Authors:  Anthony Stapon; Rongfeng Li; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2003-07-16       Impact factor: 15.419

9.  Synthesis of (3S,5R)-carbapenam-3-carboxylic acid and its role in carbapenem biosynthesis and the stereoinversion problem.

Authors:  Anthony Stapon; Rongfeng Li; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2003-12-24       Impact factor: 15.419

10.  Synthesis of aminoshikimic acid.

Authors:  Jiantao Guo; J W Frost
Journal:  Org Lett       Date:  2004-05-13       Impact factor: 6.005

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  4 in total

1.  Detection and Quantification of Ribosome Inhibition by Aminoglycoside Antibiotics in Living Bacteria Using an Orthogonal Ribosome-Controlled Fluorescent Reporter.

Authors:  Shijie Huang; Xuechen Zhu; Charles E Melançon
Journal:  ACS Chem Biol       Date:  2015-11-04       Impact factor: 5.100

2.  Mechanism of the C5 stereoinversion reaction in the biosynthesis of carbapenem antibiotics.

Authors:  Wei-chen Chang; Yisong Guo; Chen Wang; Susan E Butch; Amy C Rosenzweig; Amie K Boal; Carsten Krebs; J Martin Bollinger
Journal:  Science       Date:  2014-03-07       Impact factor: 47.728

3.  Fluorescence Assessment of the AmpR-Signaling Network of Pseudomonas aeruginosa to Exposure to β-Lactam Antibiotics.

Authors:  David A Dik; Choon Kim; Chinedu S Madukoma; Jed F Fisher; Joshua D Shrout; Shahriar Mobashery
Journal:  ACS Chem Biol       Date:  2020-02-10       Impact factor: 5.100

4.  Mechanistic insights into the bifunctional non-heme iron oxygenase carbapenem synthase by active site saturation mutagenesis.

Authors:  Ryan M Phelan; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-05-13       Impact factor: 15.419

  4 in total

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