Literature DB >> 19833698

Establishing legitimacy and function in the new transcriptome.

Harm van Bakel1, Timothy R Hughes.   

Abstract

The last decade has seen an explosion of interest in new classes of non-coding RNA. While some are now firmly established as new categories of legitimate functional RNAs, the purpose and even existence of others remain to be solidified. Here, we discuss the challenges associated with discovery and characterization of non-traditional categories of non-coding RNA.

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Year:  2009        PMID: 19833698     DOI: 10.1093/bfgp/elp037

Source DB:  PubMed          Journal:  Brief Funct Genomic Proteomic        ISSN: 1473-9550


  32 in total

Review 1.  Long non-coding RNAs and cancer: a new frontier of translational research?

Authors:  R Spizzo; M I Almeida; A Colombatti; G A Calin
Journal:  Oncogene       Date:  2012-01-23       Impact factor: 9.867

Review 2.  Transcribed dark matter: meaning or myth?

Authors:  Chris P Ponting; T Grant Belgard
Journal:  Hum Mol Genet       Date:  2010-08-25       Impact factor: 6.150

3.  An integrated evolutionary analysis of miRNA-lncRNA in mammals.

Authors:  Li Guo; Yang Zhao; Sheng Yang; Hui Zhang; Qian Wu; Feng Chen
Journal:  Mol Biol Rep       Date:  2013-11-02       Impact factor: 2.316

4.  Molecular biology: RNA discrimination.

Authors:  Monika S Kowalczyk; Douglas R Higgs; Thomas R Gingeras
Journal:  Nature       Date:  2012-02-15       Impact factor: 49.962

5.  The rocks and shallows of deep RNA sequencing: Examples in the Vibrio cholerae RNome.

Authors:  Carsten A Raabe; Chee Hock Hoe; Gerrit Randau; Juergen Brosius; Thean Hock Tang; Timofey S Rozhdestvensky
Journal:  RNA       Date:  2011-05-24       Impact factor: 4.942

6.  Long non-coding RNAs as novel biomarkers for breast cancer invasion and metastasis.

Authors:  Kaijiong Zhang; Zhenglian Luo; Yi Zhang; Xiaoyu Song; Li Zhang; Lichun Wu; Jinbo Liu
Journal:  Oncol Lett       Date:  2017-06-22       Impact factor: 2.967

Review 7.  A critical overview of long non-coding RNA in glioma etiology 2016: an update.

Authors:  Yuan-Feng Gao; Zhi-Bin Wang; Tao Zhu; Chen-Xue Mao; Xiao-Yuan Mao; Ling Li; Ji-Ye Yin; Hong-Hao Zhou; Zhao-Qian Liu
Journal:  Tumour Biol       Date:  2016-09-15

8.  Most "dark matter" transcripts are associated with known genes.

Authors:  Harm van Bakel; Corey Nislow; Benjamin J Blencowe; Timothy R Hughes
Journal:  PLoS Biol       Date:  2010-05-18       Impact factor: 8.029

9.  Intergenic and repeat transcription in human, chimpanzee and macaque brains measured by RNA-Seq.

Authors:  Augix Guohua Xu; Liu He; Zhongshan Li; Ying Xu; Mingfeng Li; Xing Fu; Zheng Yan; Yuan Yuan; Corinna Menzel; Na Li; Mehmet Somel; Hao Hu; Wei Chen; Svante Pääbo; Philipp Khaitovich
Journal:  PLoS Comput Biol       Date:  2010-07-01       Impact factor: 4.475

10.  The evolution of gene regulation, the RNA universe, and the vexed questions of artefact and noise.

Authors:  Miranda Robertson
Journal:  BMC Biol       Date:  2010-07-16       Impact factor: 7.431

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