Literature DB >> 19833651

Epigenetic responses to environmental change and their evolutionary implications.

Bryan M Turner1.   

Abstract

Chromatin is a complex of DNA, RNA, histones and non-histone proteins and provides the platform on which the transcriptional machinery operates in eukaryotes. The structure and configuration of chromatin are manipulated by families of enzymes, some catalysing the dynamic addition and removal of chemical ligands to selected protein amino acids and some directly altering or displacing the basic structural units. The activities of many of these enzymes are sensitive to environmental and metabolic agents and can thereby serve as sensors through which environmental agents can alter gene expression. Such changes can, in turn, precipitate either local or cell-wide changes as the initial effect spreads through multiple interactive networks. This review discusses the increasingly well-understood mechanisms through which these enzymes alter chromatin function. In some cases at least, it seems that the effects on gene expression may persist even after the removal of the inducing agent, and can be passed on, through mitosis, to subsequent cell generations, constituting a heritable, epigenetic change. If such changes occur in germ cells or their precursors, then they may be passed on to subsequent generations. Mechanisms are now known to exist through which an epigenetic change might give rise to a localized change in DNA sequence exerting the same functional effect, thereby converting an epigenetic to a genetic change. If the induced genetic change has phenotypic effects on which selection can act, then this hypothetical chain of events constitutes a potential route through which the environment might directly influence evolution.

Mesh:

Year:  2009        PMID: 19833651      PMCID: PMC2781845          DOI: 10.1098/rstb.2009.0125

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  126 in total

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3.  Functional interplay between histone demethylase and deacetylase enzymes.

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Journal:  Mol Cell Biol       Date:  2006-09       Impact factor: 4.272

Review 4.  Nature, nurture, or chance: stochastic gene expression and its consequences.

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Journal:  Cell       Date:  2008-10-17       Impact factor: 41.582

5.  Protein phosphatase 2A regulatory subunit B56alpha associates with c-myc and negatively regulates c-myc accumulation.

Authors:  Hugh K Arnold; Rosalie C Sears
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

6.  Substrate specificity and kinetic mechanism of the Sir2 family of NAD+-dependent histone/protein deacetylases.

Authors:  Margie T Borra; Michael R Langer; James T Slama; John M Denu
Journal:  Biochemistry       Date:  2004-08-03       Impact factor: 3.162

7.  Sir2 regulates skeletal muscle differentiation as a potential sensor of the redox state.

Authors:  Marcella Fulco; R Louis Schiltz; Simona Iezzi; M Todd King; Po Zhao; Yoshihiro Kashiwaya; Eric Hoffman; Richard L Veech; Vittorio Sartorelli
Journal:  Mol Cell       Date:  2003-07       Impact factor: 17.970

8.  Vinclozolin--the lack of a transgenerational effect after oral maternal exposure during organogenesis.

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Review 9.  Dietary histone deacetylase inhibitors: from cells to mice to man.

Authors:  Roderick H Dashwood; Emily Ho
Journal:  Semin Cancer Biol       Date:  2007-05-05       Impact factor: 15.707

10.  Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription.

Authors:  Séverine Chambeyron; Wendy A Bickmore
Journal:  Genes Dev       Date:  2004-05-15       Impact factor: 11.361

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  54 in total

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Journal:  Theor Med Bioeth       Date:  2012-06

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Authors:  Antonella Riccio
Journal:  Nat Neurosci       Date:  2010-11       Impact factor: 24.884

Review 3.  Epigenetic effects of endocrine-disrupting chemicals on female reproduction: an ovarian perspective.

Authors:  Aparna Mahakali Zama; Mehmet Uzumcu
Journal:  Front Neuroendocrinol       Date:  2010-07-04       Impact factor: 8.606

4.  Oxidative and genotoxic damages in plants in response to heavy metal stress and maintenance of genome stability.

Authors:  Subhajit Dutta; Mehali Mitra; Puja Agarwal; Kalyan Mahapatra; Sayanti De; Upasana Sett; Sujit Roy
Journal:  Plant Signal Behav       Date:  2018-08-08

5.  Evolution without standing genetic variation: change in transgenerational plastic response under persistent predation pressure.

Authors:  Arnaud Sentis; Raphaël Bertram; Nathalie Dardenne; Felipe Ramon-Portugal; Gilles Espinasse; Ines Louit; Lucie Negri; Elena Haeler; Thomas Ashkar; Théo Pannetier; James L Cunningham; Christoph Grunau; Gaël Le Trionnaire; Jean-Christophe Simon; Alexandra Magro; Benoit Pujol; Jean-Louis Hemptinne; Etienne Danchin
Journal:  Heredity (Edinb)       Date:  2018-06-29       Impact factor: 3.821

Review 6.  The sperm factor: paternal impact beyond genes.

Authors:  Simone Immler
Journal:  Heredity (Edinb)       Date:  2018-06-29       Impact factor: 3.821

7.  Impacts of climate change and environmental factors on reproduction and development in wildlife.

Authors:  Stuart R Milligan; William V Holt; Rhiannon Lloyd
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-11-27       Impact factor: 6.237

8.  Evidence of genetic instability in tumors and normal nearby tissues.

Authors:  Giuseppe Geraci; Ida D'Elia; Rosanna del Gaudio; Rossella Di Giaimo
Journal:  PLoS One       Date:  2010-02-23       Impact factor: 3.240

9.  Stable epigenetic effects impact adaptation in allopolyploid orchids (Dactylorhiza: Orchidaceae).

Authors:  Ovidiu Paun; Richard M Bateman; Michael F Fay; Mikael Hedrén; Laure Civeyrel; Mark W Chase
Journal:  Mol Biol Evol       Date:  2010-06-15       Impact factor: 16.240

Review 10.  Keeping it quiet: chromatin control of gammaherpesvirus latency.

Authors:  Paul M Lieberman
Journal:  Nat Rev Microbiol       Date:  2013-11-06       Impact factor: 60.633

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