Literature DB >> 19812568

Gene copy number: learning to count past two.

Sadeep Shrestha, Jianming Tang, Richard A Kaslow.   

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Year:  2009        PMID： 19812568     DOI： 10.1038/nm1009-1127

Source DB:  PubMed          Journal:  Nat Med        ISSN： 1078-8956            Impact factor:   53.440


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  19 in total

Review 1.  HIV-1 pathogenesis: the complexities of the CCR5-CCL3L1 complex.

Authors:  John P Moore; Per Johan Klasse
Journal:  Cell Host Microbe       Date:  2007-11-15       Impact factor: 21.023

Review 2.  Methods to detect and analyze copy number variations at the genome-wide and locus-specific levels.

Authors:  J H Lee; J T Jeon
Journal:  Cytogenet Genome Res       Date:  2009-03-11       Impact factor: 1.636

3.  CCL3L1 and HIV/AIDS susceptibility.

Authors:  Tanmoy Bhattacharya; Jennifer Stanton; Eun-Young Kim; Kevin J Kunstman; John P Phair; Lisa P Jacobson; Steven M Wolinsky
Journal:  Nat Med       Date:  2009-10       Impact factor: 53.440

4.  The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility.

Authors:  Enrique Gonzalez; Hemant Kulkarni; Hector Bolivar; Andrea Mangano; Racquel Sanchez; Gabriel Catano; Robert J Nibbs; Barry I Freedman; Marlon P Quinones; Michael J Bamshad; Krishna K Murthy; Brad H Rovin; William Bradley; Robert A Clark; Stephanie A Anderson; Robert J O'connell; Brian K Agan; Seema S Ahuja; Rosa Bologna; Luisa Sen; Matthew J Dolan; Sunil K Ahuja
Journal:  Science       Date:  2005-01-06       Impact factor: 47.728

5.  CCL3L1 and CCR5 influence cell-mediated immunity and affect HIV-AIDS pathogenesis via viral entry-independent mechanisms.

Authors:  Matthew J Dolan; Hemant Kulkarni; Jose F Camargo; Weijing He; Alison Smith; Juan-Manuel Anaya; Toshiyuki Miura; Frederick M Hecht; Manju Mamtani; Florencia Pereyra; Vincent Marconi; Andrea Mangano; Luisa Sen; Rosa Bologna; Robert A Clark; Stephanie A Anderson; Judith Delmar; Robert J O'Connell; Andrew Lloyd; Jeffrey Martin; Seema S Ahuja; Brian K Agan; Bruce D Walker; Steven G Deeks; Sunil K Ahuja
Journal:  Nat Immunol       Date:  2007-10-21       Impact factor: 25.606

6.  Large-scale copy number polymorphism in the human genome.

Authors:  Jonathan Sebat; B Lakshmi; Jennifer Troge; Joan Alexander; Janet Young; Pär Lundin; Susanne Månér; Hillary Massa; Megan Walker; Maoyen Chi; Nicholas Navin; Robert Lucito; John Healy; James Hicks; Kenny Ye; Andrew Reiner; T Conrad Gilliam; Barbara Trask; Nick Patterson; Anders Zetterberg; Michael Wigler
Journal:  Science       Date:  2004-07-23       Impact factor: 47.728

7.  Host CCL3L1 gene copy number in relation to HIV-1-specific CD4+ and CD8+ T-cell responses and viral load in South African women.

Authors:  Sharon Shalekoff; Stephen Meddows-Taylor; Diana B Schramm; Samantha L Donninger; Glenda E Gray; Gayle G Sherman; Ashraf H Coovadia; Louise Kuhn; Caroline T Tiemessen
Journal:  J Acquir Immune Defic Syndr       Date:  2008-07-01       Impact factor: 3.731

8.  CCL3L1 and HIV/AIDS susceptibility.

Authors:  Thomas J Urban; Amy C Weintrob; Jacques Fellay; Sara Colombo; Kevin V Shianna; Curtis Gumbs; Margalida Rotger; Kimberly Pelak; Kristen K Dang; Roger Detels; Jeremy J Martinson; Stephen J O'Brien; Norman L Letvin; Andrew J McMichael; Barton F Haynes; Mary Carrington; Amalio Telenti; Nelson L Michael; David B Goldstein
Journal:  Nat Med       Date:  2009-10       Impact factor: 53.440

9.  CCL3L1-CCR5 genotype influences durability of immune recovery during antiretroviral therapy of HIV-1-infected individuals.

Authors:  Sunil K Ahuja; Hemant Kulkarni; Gabriel Catano; Brian K Agan; Jose F Camargo; Weijing He; Robert J O'Connell; Vincent C Marconi; Judith Delmar; Joseph Eron; Robert A Clark; Simon Frost; Jeffrey Martin; Seema S Ahuja; Steven G Deeks; Susan Little; Douglas Richman; Frederick M Hecht; Matthew J Dolan
Journal:  Nat Med       Date:  2008-03-30       Impact factor: 53.440

10.  Experimental aspects of copy number variant assays at CCL3L1.

Authors:  Sarah F Field; Joanna M M Howson; Lisa M Maier; Susan Walker; Neil M Walker; Deborah J Smyth; John A L Armour; David G Clayton; John A Todd
Journal:  Nat Med       Date:  2009-10       Impact factor: 53.440
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  9 in total

1.  Differential quantification of CYP2D6 gene copy number by four different quantitative real-time PCR assays.

Authors:  Anuradha Ramamoorthy; David A Flockhart; Naoya Hosono; Michiaki Kubo; Yusuke Nakamura; Todd C Skaar
Journal:  Pharmacogenet Genomics       Date:  2010-07       Impact factor: 2.089

Review 2.  Copy number variation in chemokine superfamily: the complex scene of CCL3L-CCL4L genes in health and disease.

Authors:  R Colobran; E Pedrosa; L Carretero-Iglesia; M Juan
Journal:  Clin Exp Immunol       Date:  2010-08-19       Impact factor: 4.330

Review 3.  Statistical Considerations on NGS Data for Inferring Copy Number Variations.

Authors:  Jie Chen
Journal:  Methods Mol Biol       Date:  2021

4.  Variations in CCL3L gene cluster sequence and non-specific gene copy numbers.

Authors:  Sadeep Shrestha; Mawuli Nyaku; Jeffrey C Edberg
Journal:  BMC Res Notes       Date:  2010-03-16

Review 5.  Osteoimmunology: oncostatin M as a pleiotropic regulator of bone formation and resorption in health and disease.

Authors:  Natalie A Sims; Julian M W Quinn
Journal:  Bonekey Rep       Date:  2014-05-14

6.  CCL3L1 copy number variation and susceptibility to HIV-1 infection: a meta-analysis.

Authors:  SiJie Liu; Lei Yao; DongLin Ding; HuanZhang Zhu
Journal:  PLoS One       Date:  2010-12-30       Impact factor: 3.240

Review 7.  HIV-1 dynamics: a reappraisal of host and viral factors, as well as methodological issues.

Authors:  Heather A Prentice; Jianming Tang
Journal:  Viruses       Date:  2012-10-10       Impact factor: 5.048

8.  Digital genotyping of macrosatellites and multicopy genes reveals novel biological functions associated with copy number variation of large tandem repeats.

Authors:  Manisha Brahmachary; Audrey Guilmatre; Javier Quilez; Dan Hasson; Christelle Borel; Peter Warburton; Andrew J Sharp
Journal:  PLoS Genet       Date:  2014-06-19       Impact factor: 5.917

9.  Accurate measurement of gene copy number for human alpha-defensin DEFA1A3.

Authors:  Fayeza F Khan; Danielle Carpenter; Laura Mitchell; Omniah Mansouri; Holly A Black; Jess Tyson; John A L Armour
Journal:  BMC Genomics       Date:  2013-10-20       Impact factor: 3.969
  9 in total

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