Literature DB >> 19812435

Host genetics influences on HIV type-1 disease.

Jacques Fellay1.   

Abstract

HIV host genetic studies seek to describe as comprehensively as possible the effect of human genetic variation on the individual response to HIV type-1 (HIV-1) infection. Many associations between specific gene variants and HIV-1 disease outcomes have been reported over the past 15 years. Although most of them have yet to be confirmed or have been proven false-positives, the identification of several definitive genotype-phenotype associations has shed new light on HIV-1 pathogenesis. This review discusses these results in the context of the new genome-wide approaches that now make it possible to globally assess the influence of the host genome on HIV-1-related outcomes.

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Year:  2009        PMID: 19812435      PMCID: PMC2851194          DOI: 10.3851/IMP1253

Source DB:  PubMed          Journal:  Antivir Ther        ISSN: 1359-6535


  97 in total

1.  Global survey of genetic variation in CCR5, RANTES, and MIP-1alpha: impact on the epidemiology of the HIV-1 pandemic.

Authors:  E Gonzalez; R Dhanda; M Bamshad; S Mummidi; R Geevarghese; G Catano; S A Anderson; E A Walter; K T Stephan; M F Hammer; A Mangano; L Sen; R A Clark; S S Ahuja; M J Dolan; S K Ahuja
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

2.  Multiple nonfunctional alleles of CCR5 are frequent in various human populations.

Authors:  C Blanpain; B Lee; M Tackoen; B Puffer; A Boom; F Libert; M Sharron; V Wittamer; G Vassart; R W Doms; M Parmentier
Journal:  Blood       Date:  2000-09-01       Impact factor: 22.113

3.  Rapid progression to AIDS in HIV+ individuals with a structural variant of the chemokine receptor CX3CR1.

Authors:  S Faure; L Meyer; D Costagliola; C Vaneensberghe; E Genin; B Autran; J F Delfraissy; D H McDermott; P M Murphy; P Debré; I Théodorou; C Combadière
Journal:  Science       Date:  2000-03-24       Impact factor: 47.728

4.  Effects of CCR5-Delta32, CCR2-64I, and SDF-1 3'A alleles on HIV-1 disease progression: An international meta-analysis of individual-patient data.

Authors:  J P Ioannidis; P S Rosenberg; J J Goedert; L J Ashton; T L Benfield; S P Buchbinder; R A Coutinho; J Eugen-Olsen; T Gallart; T L Katzenstein; L G Kostrikis; H Kuipers; L G Louie; S A Mallal; J B Margolick; O P Martinez; L Meyer; N L Michael; E Operskalski; G Pantaleo; G P Rizzardi; H Schuitemaker; H W Sheppard; G J Stewart; I D Theodorou; H Ullum; E Vicenzi; D Vlahov; D Wilkinson; C Workman; J F Zagury; T R O'Brien
Journal:  Ann Intern Med       Date:  2001-11-06       Impact factor: 25.391

5.  Catalysis of cis/trans isomerization in native HIV-1 capsid by human cyclophilin A.

Authors:  Daryl A Bosco; Elan Z Eisenmesser; Susan Pochapsky; Wesley I Sundquist; Dorothee Kern
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

6.  Effect of a single amino acid change in MHC class I molecules on the rate of progression to AIDS.

Authors:  X Gao; G W Nelson; P Karacki; M P Martin; J Phair; R Kaslow; J J Goedert; S Buchbinder; K Hoots; D Vlahov; S J O'Brien; M Carrington
Journal:  N Engl J Med       Date:  2001-05-31       Impact factor: 91.245

7.  Chemokine RANTES promoter polymorphism affects risk of both HIV infection and disease progression in the Multicenter AIDS Cohort Study.

Authors:  D H McDermott; M J Beecroft; C A Kleeberger; F M Al-Sharif; W E Ollier; P A Zimmerman; B A Boatin; S F Leitman; R Detels; A H Hajeer; P M Murphy
Journal:  AIDS       Date:  2000-12-01       Impact factor: 4.177

8.  HLA B*5701 is highly associated with restriction of virus replication in a subgroup of HIV-infected long term nonprogressors.

Authors:  S A Migueles; M S Sabbaghian; W L Shupert; M P Bettinotti; F M Marincola; L Martino; C W Hallahan; S M Selig; D Schwartz; J Sullivan; M Connors
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

9.  Modulating influence on HIV/AIDS by interacting RANTES gene variants.

Authors:  Ping An; George W Nelson; Lihua Wang; Sharyne Donfield; James J Goedert; John Phair; David Vlahov; Susan Buchbinder; William L Farrar; William Modi; Stephen J O'Brien; Cheryl A Winkler
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-11       Impact factor: 11.205

10.  A frequent functional toll-like receptor 7 polymorphism is associated with accelerated HIV-1 disease progression.

Authors:  Djin-Ye Oh; Konstantin Baumann; Osamah Hamouda; Jana K Eckert; Konrad Neumann; Claudia Kücherer; Barbara Bartmeyer; Gabriele Poggensee; Nari Oh; Axel Pruss; Heiko Jessen; Ralf R Schumann
Journal:  AIDS       Date:  2009-01-28       Impact factor: 4.177

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  13 in total

Review 1.  Mendelian randomization: potential use of genetics to enable causal inferences regarding HIV-associated biomarkers and outcomes.

Authors:  Weijing He; John Castiblanco; Elizabeth A Walter; Jason F Okulicz; Sunil K Ahuja
Journal:  Curr Opin HIV AIDS       Date:  2010-11       Impact factor: 4.283

2.  Associations of host genetic variants on CD4⁺ lymphocyte count and plasma HIV-1 RNA in antiretroviral naïve children.

Authors:  Min Qin; Sean Brummel; Kumud K Singh; Terence Fenton; Stephen A Spector
Journal:  Pediatr Infect Dis J       Date:  2014-09       Impact factor: 2.129

3.  Interleukin gene polymorphisms and susceptibility to HIV-1 infection: a meta-analysis.

Authors:  Chrissa G Tsiara; Georgios K Nikolopoulos; Niki L Dimou; Katerina G Pantavou; Pantelis G Bagos; Benedicta Mensah; Michael Talias; Georgia G Braliou; Dimitra Paraskeva; Stefanos Bonovas; Angelos Hatzakis
Journal:  J Genet       Date:  2018-03       Impact factor: 1.166

4.  Is there a genetic basis for health disparities in human immunodeficiency virus disease?

Authors:  Cheryl Winkler
Journal:  Mt Sinai J Med       Date:  2010 Mar-Apr

5.  Genome-wide association study reveals genetic variants associated with HIV-1C infection in a Botswana study population.

Authors:  Andrey K Shevchenko; Daria V Zhernakova; Sergey V Malov; Alexey Komissarov; Sofia M Kolchanova; Gaik Tamazian; Alexey Antonik; Nikolay Cherkasov; Sergey Kliver; Anastasiia Turenko; Mikhail Rotkevich; Igor Evsyukov; David Vlahov; Prisca K Thami; Simani Gaseitsiwe; Vladimir Novitsky; Myron Essex; Stephen J O'Brien
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-23       Impact factor: 12.779

Review 6.  Host genetics and HIV-1: the final phase?

Authors:  Jacques Fellay; Kevin V Shianna; Amalio Telenti; David B Goldstein
Journal:  PLoS Pathog       Date:  2010-10-14       Impact factor: 6.823

7.  Functional differences exist between TNFα promoters encoding the common -237G SNP and the rarer HLA-B*5701-linked A variant.

Authors:  Peter D Simpson; Eirini Moysi; Kate Wicks; Kritika Sudan; Sarah L Rowland-Jones; Andrew J McMichael; Julian Knight; Geraldine M Gillespie
Journal:  PLoS One       Date:  2012-07-13       Impact factor: 3.240

8.  Immunogenetics: Genome-Wide Association of Non-Progressive HIV and Viral Load Control: HLA Genes and Beyond.

Authors:  Sophie Limou; Jean-François Zagury
Journal:  Front Immunol       Date:  2013-05-27       Impact factor: 7.561

9.  Characterization of LEDGF/p75 genetic variants and association with HIV-1 disease progression.

Authors:  Peter Messiaen; Ward De Spiegelaere; Jose Alcami; Karen Vervisch; Petra Van Acker; Bruno Verhasselt; Pieter Meuwissen; Esther Calonge; Nuria Gonzalez; Felix Gutierrez-Rodero; Carmen Rodriguez-Martín; Erica Sermijn; Bruce Poppe; Dirk Vogelaers; Chris Verhofstede; Linos Vandekerckhove
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

10.  Identification of Genes Whose Expression Profile Is Associated with Non-Progression towards AIDS Using eQTLs.

Authors:  Jean-Louis Spadoni; Pierre Rucart; Sigrid Le Clerc; Daniëlle van Manen; Cédric Coulonges; Damien Ulveling; Vincent Laville; Taoufik Labib; Lieng Taing; Olivier Delaneau; Matthieu Montes; Hanneke Schuitemaker; Josselin Noirel; Jean-François Zagury
Journal:  PLoS One       Date:  2015-09-14       Impact factor: 3.240

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