Literature DB >> 19804755

Nbs1 flexibly tethers Ctp1 and Mre11-Rad50 to coordinate DNA double-strand break processing and repair.

R Scott Williams1, Gerald E Dodson, Oliver Limbo, Yoshiki Yamada, Jessica S Williams, Grant Guenther, Scott Classen, J N Mark Glover, Hiroshi Iwasaki, Paul Russell, John A Tainer.   

Abstract

The Nijmegen breakage syndrome 1 (Nbs1) subunit of the Mre11-Rad50-Nbs1 (MRN) complex protects genome integrity by coordinating double-strand break (DSB) repair and checkpoint signaling through undefined interactions with ATM, MDC1, and Sae2/Ctp1/CtIP. Here, fission yeast and human Nbs1 structures defined by X-ray crystallography and small angle X-ray scattering (SAXS) reveal Nbs1 cardinal features: fused, extended, FHA-BRCT(1)-BRCT(2) domains flexibly linked to C-terminal Mre11- and ATM-binding motifs. Genetic, biochemical, and structural analyses of an Nbs1-Ctp1 complex show Nbs1 recruits phosphorylated Ctp1 to DSBs via binding of the Nbs1 FHA domain to a Ctp1 pThr-Asp motif. Nbs1 structures further identify an extensive FHA-BRCT interface, a bipartite MDC1-binding scaffold, an extended conformational switch, and the molecular consequences associated with cancer predisposing Nijmegen breakage syndrome mutations. Tethering of Ctp1 to a flexible Nbs1 arm suggests a mechanism for restricting DNA end processing and homologous recombination activities of Sae2/Ctp1/CtIP to the immediate vicinity of DSBs.

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Year:  2009        PMID: 19804755      PMCID: PMC2762657          DOI: 10.1016/j.cell.2009.07.033

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  53 in total

1.  Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily.

Authors:  K P Hopfner; A Karcher; D S Shin; L Craig; L M Arthur; J P Carney; J A Tainer
Journal:  Cell       Date:  2000-06-23       Impact factor: 41.582

2.  Crystal structure of the BRCT repeat region from the breast cancer-associated protein BRCA1.

Authors:  R S Williams; R Green; J N Glover
Journal:  Nat Struct Biol       Date:  2001-10

3.  An alternative mode of translation permits production of a variant NBS1 protein from the common Nijmegen breakage syndrome allele.

Authors:  R S Maser; R Zinkel; J H Petrini
Journal:  Nat Genet       Date:  2001-04       Impact factor: 38.330

4.  The Rad50 zinc-hook is a structure joining Mre11 complexes in DNA recombination and repair.

Authors:  Karl-Peter Hopfner; Lisa Craig; Gabriel Moncalian; Robert A Zinkel; Takehiko Usui; Barbara A L Owen; Annette Karcher; Brendan Henderson; Jean-Luc Bodmer; Cynthia T McMurray; James P Carney; John H J Petrini; John A Tainer
Journal:  Nature       Date:  2002-08-01       Impact factor: 49.962

5.  The DNA double-strand break repair gene hMRE11 is mutated in individuals with an ataxia-telangiectasia-like disorder.

Authors:  G S Stewart; R S Maser; T Stankovic; D A Bressan; M I Kaplan; N G Jaspers; A Raams; P J Byrd; J H Petrini; A M Taylor
Journal:  Cell       Date:  1999-12-10       Impact factor: 41.582

6.  Promotion of Dnl4-catalyzed DNA end-joining by the Rad50/Mre11/Xrs2 and Hdf1/Hdf2 complexes.

Authors:  L Chen; K Trujillo; W Ramos; P Sung; A E Tomkinson
Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

7.  Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase.

Authors:  K P Hopfner; A Karcher; L Craig; T T Woo; J P Carney; J A Tainer
Journal:  Cell       Date:  2001-05-18       Impact factor: 41.582

8.  MDC1 is required for the intra-S-phase DNA damage checkpoint.

Authors:  Michal Goldberg; Manuel Stucki; Jacob Falck; Damien D'Amours; Dinah Rahman; Darryl Pappin; Jiri Bartek; Stephen P Jackson
Journal:  Nature       Date:  2003-02-27       Impact factor: 49.962

9.  Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2.

Authors:  David S Shin; Luca Pellegrini; Douglas S Daniels; Biana Yelent; Lisa Craig; Debbie Bates; David S Yu; Mahmud K Shivji; Chiharu Hitomi; Andrew S Arvai; Niels Volkmann; Hiro Tsuruta; Tom L Blundell; Ashok R Venkitaraman; John A Tainer
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

10.  Distinct requirements for the Rad32(Mre11) nuclease and Ctp1(CtIP) in the removal of covalently bound topoisomerase I and II from DNA.

Authors:  Edgar Hartsuiker; Matthew J Neale; Antony M Carr
Journal:  Mol Cell       Date:  2009-01-16       Impact factor: 17.970

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  182 in total

1.  Saccharomyces cerevisiae Dbf4 has unique fold necessary for interaction with Rad53 kinase.

Authors:  Lindsay A Matthews; Darryl R Jones; Ajai A Prasad; Bernard P Duncker; Alba Guarné
Journal:  J Biol Chem       Date:  2011-11-29       Impact factor: 5.157

2.  ATP hydrolysis by RAD50 protein switches MRE11 enzyme from endonuclease to exonuclease.

Authors:  Jerzy Majka; Brian Alford; Juan Ausio; Ron M Finn; Cynthia T McMurray
Journal:  J Biol Chem       Date:  2011-11-18       Impact factor: 5.157

Review 3.  Mechanisms and regulation of DNA end resection.

Authors:  Maria Pia Longhese; Diego Bonetti; Nicola Manfrini; Michela Clerici
Journal:  EMBO J       Date:  2010-07-20       Impact factor: 11.598

Review 4.  Structural dynamics in DNA damage signaling and repair.

Authors:  J Jefferson P Perry; Elizabeth Cotner-Gohara; Tom Ellenberger; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2010-05-01       Impact factor: 6.809

5.  Molecular basis of BACH1/FANCJ recognition by TopBP1 in DNA replication checkpoint control.

Authors:  Charles Chung Yun Leung; Zihua Gong; Junjie Chen; J N Mark Glover
Journal:  J Biol Chem       Date:  2010-12-02       Impact factor: 5.157

6.  ATM regulates Mre11-dependent DNA end-degradation and microhomology-mediated end joining.

Authors:  Elias A Rahal; Leigh A Henricksen; Yuling Li; R Scott Williams; John A Tainer; Kathleen Dixon
Journal:  Cell Cycle       Date:  2010-07-12       Impact factor: 4.534

Review 7.  A structural model for regulation of NHEJ by DNA-PKcs autophosphorylation.

Authors:  Tracey A Dobbs; John A Tainer; Susan P Lees-Miller
Journal:  DNA Repair (Amst)       Date:  2010-10-28

Review 8.  Mre11-Rad50-Nbs1 conformations and the control of sensing, signaling, and effector responses at DNA double-strand breaks.

Authors:  Gareth J Williams; Susan P Lees-Miller; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2010-10-28

9.  Phosphorylation of Sae2 Mediates Forkhead-associated (FHA) Domain-specific Interaction and Regulates Its DNA Repair Function.

Authors:  Jason Liang; Raymond T Suhandynata; Huilin Zhou
Journal:  J Biol Chem       Date:  2015-03-11       Impact factor: 5.157

10.  Mutation of Conserved Mre11 Residues Alter Protein Dynamics to Separate Nuclease Functions.

Authors:  Samiur Rahman; Mahtab Beikzadeh; Marella D Canny; Navneet Kaur; Michael P Latham
Journal:  J Mol Biol       Date:  2020-04-01       Impact factor: 5.469

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