Literature DB >> 12941707

Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2.

David S Shin1, Luca Pellegrini, Douglas S Daniels, Biana Yelent, Lisa Craig, Debbie Bates, David S Yu, Mahmud K Shivji, Chiharu Hitomi, Andrew S Arvai, Niels Volkmann, Hiro Tsuruta, Tom L Blundell, Ashok R Venkitaraman, John A Tainer.   

Abstract

To clarify RAD51 interactions controlling homologous recombination, we report here the crystal structure of the full-length RAD51 homolog from Pyrococcus furiosus. The structure reveals how RAD51 proteins assemble into inactive heptameric rings and active DNA-bound filaments matching three-dimensional electron microscopy reconstructions. A polymerization motif (RAD51-PM) tethers individual subunits together to form assemblies. Subunit interactions support an allosteric 'switch' promoting ATPase activity and DNA binding roles for the N-terminal domain helix-hairpin-helix (HhH) motif. Structural and mutational results characterize RAD51 interactions with the breast cancer susceptibility protein BRCA2 in higher eukaryotes. A designed P.furiosus RAD51 mutant binds BRC repeats and forms BRCA2-dependent nuclear foci in human cells in response to gamma-irradiation-induced DNA damage, similar to human RAD51. These results show that BRCA2 repeats mimic the RAD51-PM and imply analogous RAD51 interactions with RAD52 and RAD54. Both BRCA2 and RAD54 may act as antagonists and chaperones for RAD51 filament assembly by coupling RAD51 interface exchanges with DNA binding. Together, these structural and mutational results support an interface exchange hypothesis for coordinated protein interactions in homologous recombination.

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Year:  2003        PMID: 12941707      PMCID: PMC202371          DOI: 10.1093/emboj/cdg429

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  42 in total

1.  Structure of the single-strand annealing domain of human RAD52 protein.

Authors:  Martin R Singleton; Lois M Wentzell; Yilun Liu; Stephen C West; Dale B Wigley
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-07       Impact factor: 11.205

2.  Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form.

Authors:  Wataru Kagawa; Hitoshi Kurumizaka; Ryuichiro Ishitani; Shuya Fukai; Osamu Nureki; Takehiko Shibata; Shigeyuki Yokoyama
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

3.  Structure of reaction intermediates formed during Saccharomyces cerevisiae Rad51-catalyzed strand transfer.

Authors:  Victor F Holmes; Francesca Scandellari; Kirsten R Benjamin; Nicholas R Cozzarelli
Journal:  J Biol Chem       Date:  2002-07-29       Impact factor: 5.157

4.  Functional cross-talk among Rad51, Rad54, and replication protein A in heteroduplex DNA joint formation.

Authors:  Stephen Van Komen; Galina Petukhova; Stefan Sigurdsson; Patrick Sung
Journal:  J Biol Chem       Date:  2002-09-10       Impact factor: 5.157

5.  Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA.

Authors:  X Yu; S A Jacobs; S C West; T Ogawa; E H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

6.  Comparison of bacteriophage T4 UvsX and human Rad51 filaments suggests that RecA-like polymers may have evolved independently.

Authors:  S Yang; M S VanLoock; X Yu; E H Egelman
Journal:  J Mol Biol       Date:  2001-10-05       Impact factor: 5.469

7.  Biochemical characterization of the human RAD51 protein. I. ATP hydrolysis.

Authors:  Gregory Tombline; Richard Fishel
Journal:  J Biol Chem       Date:  2002-02-11       Impact factor: 5.157

8.  BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.

Authors:  Haijuan Yang; Philip D Jeffrey; Julie Miller; Elspeth Kinnucan; Yutong Sun; Nicolas H Thoma; Ning Zheng; Phang-Lang Chen; Wen-Hwa Lee; Nikola P Pavletich
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

9.  Rad52 protein associates with replication protein A (RPA)-single-stranded DNA to accelerate Rad51-mediated displacement of RPA and presynaptic complex formation.

Authors:  Tomohiko Sugiyama; Stephen C Kowalczykowski
Journal:  J Biol Chem       Date:  2002-06-19       Impact factor: 5.157

10.  Mutations in yeast Rad51 that partially bypass the requirement for Rad55 and Rad57 in DNA repair by increasing the stability of Rad51-DNA complexes.

Authors:  Gary S Fortin; Lorraine S Symington
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

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  119 in total

1.  Identifying DNA-binding proteins using structural motifs and the electrostatic potential.

Authors:  Hugh P Shanahan; Mario A Garcia; Susan Jones; Janet M Thornton
Journal:  Nucleic Acids Res       Date:  2004-09-08       Impact factor: 16.971

Review 2.  Structural dynamics in DNA damage signaling and repair.

Authors:  J Jefferson P Perry; Elizabeth Cotner-Gohara; Tom Ellenberger; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2010-05-01       Impact factor: 6.809

3.  DNA repair: A protein giant in its entirety.

Authors:  Lee Zou
Journal:  Nature       Date:  2010-10-07       Impact factor: 49.962

4.  The Type IV Pilus Assembly ATPase PilB of Myxococcus xanthus Interacts with the Inner Membrane Platform Protein PilC and the Nucleotide-binding Protein PilM.

Authors:  Lisa Franziska Bischof; Carmen Friedrich; Andrea Harms; Lotte Søgaard-Andersen; Chris van der Does
Journal:  J Biol Chem       Date:  2016-02-05       Impact factor: 5.157

Review 5.  Homologous recombination and human health: the roles of BRCA1, BRCA2, and associated proteins.

Authors:  Rohit Prakash; Yu Zhang; Weiran Feng; Maria Jasin
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-04-01       Impact factor: 10.005

6.  Crystal structure of the phage T4 recombinase UvsX and its functional interaction with the T4 SF2 helicase UvsW.

Authors:  Stefan Gajewski; Michael R Webb; Vitold Galkin; Edward H Egelman; Kenneth N Kreuzer; Stephen W White
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

7.  Brh2-Dss1 interplay enables properly controlled recombination in Ustilago maydis.

Authors:  Milorad Kojic; Qingwen Zhou; Michael Lisby; William K Holloman
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

8.  Discovery of mutations in homologous recombination genes in African-American women with breast cancer.

Authors:  Yuan Chun Ding; Aaron W Adamson; Linda Steele; Adam M Bailis; Esther M John; Gail Tomlinson; Susan L Neuhausen
Journal:  Fam Cancer       Date:  2018-04       Impact factor: 2.375

9.  Genetic steps of mammalian homologous repair with distinct mutagenic consequences.

Authors:  Jeremy M Stark; Andrew J Pierce; Jin Oh; Albert Pastink; Maria Jasin
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

10.  Overexpression of Drosophila Rad51 protein (DmRad51) disrupts cell cycle progression and leads to apoptosis.

Authors:  Siuk Yoo; Bruce D McKee
Journal:  Chromosoma       Date:  2004-07-15       Impact factor: 4.316

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