Literature DB >> 19802707

Unravelling the evolutionary origins of X chromosome inactivation in mammals: insights from marsupials and monotremes.

Janine E Deakin1, Julie Chaumeil, Timothy A Hore, Jennifer A Marshall Graves.   

Abstract

Determining the evolutionary origin of X inactivation mechanisms in mammals requires knowledge of features of X inactivation across all three major mammal lineages; monotremes, marsupials and eutherians. In the past, research into X inactivation in marsupials and monotremes lagged far behind the major advances made in understanding the mechanisms of X inactivation in human and mouse. Fragmentary knowledge of the genic content and sequence of marsupial and monotreme X chromosomes has been alleviated by the recent release of genome sequences for two marsupials and one monotreme. This has lead to a number of important findings, among which is the absence of XIST in marsupials and monotremes, and the surprising finding that X-borne genes in platypus are subject to stochastic transcriptional inhibition rather than whole chromosome inactivation. Availability of sequence data, and new techniques for studying expression and chromatin modification, now make rapid advance possible.

Entities:  

Mesh:

Year:  2009        PMID: 19802707     DOI: 10.1007/s10577-009-9058-6

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  94 in total

1.  Did genomic imprinting and X chromosome inactivation arise from stochastic expression?

Authors:  R Ohlsson; A Paldi; J A Graves
Journal:  Trends Genet       Date:  2001-03       Impact factor: 11.639

2.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

3.  Integrated kinetics of X chromosome inactivation in differentiating embryonic stem cells.

Authors:  J Chaumeil; I Okamoto; M Guggiari; E Heard
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

4.  Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic.

Authors:  S Augui; G J Filion; S Huart; E Nora; M Guggiari; M Maresca; A F Stewart; E Heard
Journal:  Science       Date:  2007-12-07       Impact factor: 47.728

5.  Histone underacetylation is an ancient component of mammalian X chromosome inactivation.

Authors:  M J Wakefield; A M Keohane; B M Turner; J A Graves
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

6.  Sex chromosome homology and incomplete, tissue-specific X-inactivation suggest that monotremes represent an intermediate stage of mammalian sex chromosome evolution.

Authors:  J M Wrigley; J A Graves
Journal:  J Hered       Date:  1988 Mar-Apr       Impact factor: 2.645

7.  Late DNA replication in the paternally derived X chromosome of female kangaroos.

Authors:  G B Sharman
Journal:  Nature       Date:  1971-03-26       Impact factor: 49.962

8.  Sex chromosome mosaicism in the marsupial genera Isoodon and Perameles.

Authors:  D L Hayman; P G Martin
Journal:  Genetics       Date:  1965-12       Impact factor: 4.562

9.  Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences.

Authors:  Tarjei S Mikkelsen; Matthew J Wakefield; Bronwen Aken; Chris T Amemiya; Jean L Chang; Shannon Duke; Manuel Garber; Andrew J Gentles; Leo Goodstadt; Andreas Heger; Jerzy Jurka; Michael Kamal; Evan Mauceli; Stephen M J Searle; Ted Sharpe; Michelle L Baker; Mark A Batzer; Panayiotis V Benos; Katherine Belov; Michele Clamp; April Cook; James Cuff; Radhika Das; Lance Davidow; Janine E Deakin; Melissa J Fazzari; Jacob L Glass; Manfred Grabherr; John M Greally; Wanjun Gu; Timothy A Hore; Gavin A Huttley; Michael Kleber; Randy L Jirtle; Edda Koina; Jeannie T Lee; Shaun Mahony; Marco A Marra; Robert D Miller; Robert D Nicholls; Mayumi Oda; Anthony T Papenfuss; Zuly E Parra; David D Pollock; David A Ray; Jacqueline E Schein; Terence P Speed; Katherine Thompson; John L VandeBerg; Claire M Wade; Jerilyn A Walker; Paul D Waters; Caleb Webber; Jennifer R Weidman; Xiaohui Xie; Michael C Zody; Jennifer A Marshall Graves; Chris P Ponting; Matthew Breen; Paul B Samollow; Eric S Lander; Kerstin Lindblad-Toh
Journal:  Nature       Date:  2007-05-10       Impact factor: 49.962

10.  Genome analysis of the platypus reveals unique signatures of evolution.

Authors:  Wesley C Warren; LaDeana W Hillier; Jennifer A Marshall Graves; Ewan Birney; Chris P Ponting; Frank Grützner; Katherine Belov; Webb Miller; Laura Clarke; Asif T Chinwalla; Shiaw-Pyng Yang; Andreas Heger; Devin P Locke; Pat Miethke; Paul D Waters; Frédéric Veyrunes; Lucinda Fulton; Bob Fulton; Tina Graves; John Wallis; Xose S Puente; Carlos López-Otín; Gonzalo R Ordóñez; Evan E Eichler; Lin Chen; Ze Cheng; Janine E Deakin; Amber Alsop; Katherine Thompson; Patrick Kirby; Anthony T Papenfuss; Matthew J Wakefield; Tsviya Olender; Doron Lancet; Gavin A Huttley; Arian F A Smit; Andrew Pask; Peter Temple-Smith; Mark A Batzer; Jerilyn A Walker; Miriam K Konkel; Robert S Harris; Camilla M Whittington; Emily S W Wong; Neil J Gemmell; Emmanuel Buschiazzo; Iris M Vargas Jentzsch; Angelika Merkel; Juergen Schmitz; Anja Zemann; Gennady Churakov; Jan Ole Kriegs; Juergen Brosius; Elizabeth P Murchison; Ravi Sachidanandam; Carly Smith; Gregory J Hannon; Enkhjargal Tsend-Ayush; Daniel McMillan; Rosalind Attenborough; Willem Rens; Malcolm Ferguson-Smith; Christophe M Lefèvre; Julie A Sharp; Kevin R Nicholas; David A Ray; Michael Kube; Richard Reinhardt; Thomas H Pringle; James Taylor; Russell C Jones; Brett Nixon; Jean-Louis Dacheux; Hitoshi Niwa; Yoko Sekita; Xiaoqiu Huang; Alexander Stark; Pouya Kheradpour; Manolis Kellis; Paul Flicek; Yuan Chen; Caleb Webber; Ross Hardison; Joanne Nelson; Kym Hallsworth-Pepin; Kim Delehaunty; Chris Markovic; Pat Minx; Yucheng Feng; Colin Kremitzki; Makedonka Mitreva; Jarret Glasscock; Todd Wylie; Patricia Wohldmann; Prathapan Thiru; Michael N Nhan; Craig S Pohl; Scott M Smith; Shunfeng Hou; Mikhail Nefedov; Pieter J de Jong; Marilyn B Renfree; Elaine R Mardis; Richard K Wilson
Journal:  Nature       Date:  2008-05-08       Impact factor: 49.962

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  29 in total

Review 1.  The sex-specific region of sex chromosomes in animals and plants.

Authors:  Andrea R Gschwend; Laura A Weingartner; Richard C Moore; Ray Ming
Journal:  Chromosome Res       Date:  2012-01       Impact factor: 5.239

2.  Synapsis, recombination, and chromatin remodeling in the XY body of armadillos.

Authors:  Roberta B Sciurano; Mónica I Rahn; Luis Rossi; Juan Pablo Luaces; María Susana Merani; Alberto J Solari
Journal:  Chromosome Res       Date:  2012-01-25       Impact factor: 5.239

Review 3.  The evolution of X chromosome inactivation in mammals: the demise of Ohno's hypothesis?

Authors:  Eugénie Pessia; Jan Engelstädter; Gabriel A B Marais
Journal:  Cell Mol Life Sci       Date:  2013-10-31       Impact factor: 9.261

4.  Haldane's rule in marsupials: what happens when both sexes are functionally hemizygous?

Authors:  Eric T Watson; Jeffery P Demuth
Journal:  J Hered       Date:  2012-02-29       Impact factor: 2.645

Review 5.  Genes that escape from X inactivation.

Authors:  Joel B Berletch; Fan Yang; Jun Xu; Laura Carrel; Christine M Disteche
Journal:  Hum Genet       Date:  2011-05-26       Impact factor: 4.132

6.  Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome.

Authors:  Eugénie Pessia; Takashi Makino; Marc Bailly-Bechet; Aoife McLysaght; Gabriel A B Marais
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-05       Impact factor: 11.205

Review 7.  Role of ATRX in chromatin structure and function: implications for chromosome instability and human disease.

Authors:  Rabindranath De La Fuente; Claudia Baumann; Maria M Viveiros
Journal:  Reproduction       Date:  2011-06-08       Impact factor: 3.906

Review 8.  Programmed DNA Elimination in Vertebrates.

Authors:  Jeramiah J Smith; Vladimir A Timoshevskiy; Cody Saraceno
Journal:  Annu Rev Anim Biosci       Date:  2020-09-28       Impact factor: 8.923

9.  Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation.

Authors:  Jennifer Grant; Shantha K Mahadevaiah; Pavel Khil; Mahesh N Sangrithi; Hélène Royo; Janine Duckworth; John R McCarrey; John L VandeBerg; Marilyn B Renfree; Willie Taylor; Greg Elgar; R Daniel Camerini-Otero; Mike J Gilchrist; James M A Turner
Journal:  Nature       Date:  2012-07-12       Impact factor: 49.962

10.  Sex-differential selection and the evolution of X inactivation strategies.

Authors:  Tim Connallon; Andrew G Clark
Journal:  PLoS Genet       Date:  2013-04-18       Impact factor: 5.917

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