Literature DB >> 19801390

Deinococcus wulumuqiensis sp. nov., and Deinococcus xibeiensis sp. nov., isolated from radiation-polluted soil.

Wei Wang1,2, Jun Mao1, Zhidong Zhang1, Qiyong Tang1, Yuqing Xie1, Jing Zhu1, Lixin Zhang3, Zhiheng Liu3, Yuhu Shi1,2, Michael Goodfellow4.   

Abstract

The taxonomic positions of two gamma- and UV-ray-resistant strains isolated from radiation-polluted soil in north-west China were determined in a polyphasic study. The organisms, designated R12(T) and R13(T), were Gram-stain-positive, non-spore-forming cocci, which contained MK-8 as the major respiratory quinone and C(16 : 1)omega7c and C(16 : 0) as major fatty acids. The cell walls of strains R12(T) and R13(T) contained ornithine. Phylogenetic analysis based on 16S rRNA gene sequences and DNA-DNA hybridizations showed that strains R12(T) and R13(T) are members of novel species belonging to the genus Deinococcus, with Deinococcus radiodurans DSM 20539(T) as the closest relative. The isolates R12(T) and R13(T) shared 97 and 97.1 % 16S rRNA gene similarity, respectively, and 29.5 and 33.3 % DNA-DNA relatedness, respectively, with D. radiodurans DSM 20539(T). The DNA G+C contents of isolates R12(T) and R13(T) were 66.7 and 63.8 %, respectively. On the basis of phenotypic tests and other results, two species, Deinococcus wulumuqiensis sp. nov. (type strain R12(T) =CGMCC 1.8884(T) =NBRC 105665(T)) and Deinococcus xibeiensis sp. nov. (type strain R13(T) =CGMCC 1.8885(T) =NBRC 105666(T)), are proposed.

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Year:  2009        PMID: 19801390     DOI: 10.1099/ijs.0.015917-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  9 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

Review 2.  Oxidative stress resistance in Deinococcus radiodurans.

Authors:  Dea Slade; Miroslav Radman
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

3.  Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil.

Authors:  Jae-Jin Lee; Hyun Ji Lee; Gi Seon Jang; Ja Myoung Yu; Ji Yoon Cha; Su Jeong Kim; Eun Bit Lee; Myung Kyum Kim
Journal:  J Microbiol       Date:  2013-06-28       Impact factor: 3.422

4.  Complete genome sequence of Deinococcus maricopensis type strain (LB-34).

Authors:  Rüdiger Pukall; Ahmet Zeytun; Susan Lucas; Alla Lapidus; Nancy Hammon; Shweta Deshpande; Matt Nolan; Jan-Fang Cheng; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Mikhailova; Natalia Ivanova; Konstantinos Mavromatis; Amrita Pati; Roxane Tapia; Cliff Han; Lynne Goodwin; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Evelyne-Marie Brambilla; Manfred Rohde; Markus Göker; J Chris Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2011-04-25

Review 5.  The diversity and commonalities of the radiation-resistance mechanisms of Deinococcus and its up-to-date applications.

Authors:  Mengmeng Jin; Anqi Xiao; Liying Zhu; Zhidong Zhang; He Huang; Ling Jiang
Journal:  AMB Express       Date:  2019-09-03       Impact factor: 3.298

6.  Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune.

Authors:  Ji Hee Lee; Jong-Hyun Jung; Min-Kyu Kim; Sangyong Lim
Journal:  Curr Microbiol       Date:  2022-09-25       Impact factor: 2.343

7.  Genome Sequence of a Gamma- and UV-Ray-Resistant Strain, Deinococcus wulumuqiensis R12.

Authors:  Xian Xu; Ling Jiang; Zhidong Zhang; Yuhu Shi; He Huang
Journal:  Genome Announc       Date:  2013-05-09

8.  Draft Genome Sequence of Deinococcus xibeiensis R13, a New Carotenoid-Producing Strain.

Authors:  Yaochi Hu; Xian Xu; Ping Song; Ling Jiang; Zhidong Zhang; He Huang
Journal:  Genome Announc       Date:  2013-12-05

9.  Analysis and expression of the carotenoid biosynthesis genes from Deinococcus wulumuqiensis R12 in engineered Escherichia coli.

Authors:  Xian Xu; Liqing Tian; Jiali Xu; Chengjia Xie; Ling Jiang; He Huang
Journal:  AMB Express       Date:  2018-06-02       Impact factor: 3.298

  9 in total

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