Literature DB >> 19800273

Determination of the self-diffusion coefficient of intracellular water using PGSE NMR with variable gradient pulse length.

Ingrid Slund1, Daniel Topgaard.   

Abstract

A new pulsed-gradient spin-echo NMR protocol for assessing the local self-diffusion coefficient D(0) of water confined within living cells is proposed. Equations for the apparent mean-square displacement <Z(2)> as a function of the effective diffusion time t(d) and the duration of the displacement-encoding gradient pulses delta are derived. The standard method of estimating D(0)--reducing t(d) until the influence of collisions between the water molecules and the plasma membrane can be neglected--often fails because of the small size of typical cells. As demonstrated here, the decrease of the apparent <Z(2)> with increasing delta at constant t(d) can be utilized to measure D(0).

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Year:  2009        PMID: 19800273     DOI: 10.1016/j.jmr.2009.09.006

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  15 in total

1.  A single-shot measurement of time-dependent diffusion over sub-millisecond timescales using static field gradient NMR.

Authors:  Teddy X Cai; Nathan H Williamson; Velencia J Witherspoon; Rea Ravin; Peter J Basser
Journal:  J Chem Phys       Date:  2021-03-21       Impact factor: 3.488

2.  What dominates the time dependence of diffusion transverse to axons: Intra- or extra-axonal water?

Authors:  Hong-Hsi Lee; Els Fieremans; Dmitry S Novikov
Journal:  Neuroimage       Date:  2017-12-16       Impact factor: 6.556

Review 3.  Physical and numerical phantoms for the validation of brain microstructural MRI: A cookbook.

Authors:  Els Fieremans; Hong-Hsi Lee
Journal:  Neuroimage       Date:  2018-06-18       Impact factor: 6.556

4.  INDIANA: An in-cell diffusion method to characterize the size, abundance and permeability of cells.

Authors:  Gogulan Karunanithy; Richard J Wheeler; Louise R Tear; Nicola J Farrer; Stephen Faulkner; Andrew J Baldwin
Journal:  J Magn Reson       Date:  2019-01-06       Impact factor: 2.229

5.  Accurate noninvasive measurement of cell size and compartment shape anisotropy in yeast cells using double-pulsed field gradient MR.

Authors:  Noam Shemesh; Evren Özarslan; Peter J Basser; Yoram Cohen
Journal:  NMR Biomed       Date:  2011-07-22       Impact factor: 4.044

6.  Precise Inference and Characterization of Structural Organization (PICASO) of tissue from molecular diffusion.

Authors:  Lipeng Ning; Evren Özarslan; Carl-Fredrik Westin; Yogesh Rathi
Journal:  Neuroimage       Date:  2016-10-14       Impact factor: 6.556

Review 7.  The role of tissue microstructure and water exchange in biophysical modelling of diffusion in white matter.

Authors:  Markus Nilsson; Danielle van Westen; Freddy Ståhlberg; Pia C Sundgren; Jimmy Lätt
Journal:  MAGMA       Date:  2013-02-27       Impact factor: 2.310

8.  Apparent exchange rate for breast cancer characterization.

Authors:  Samo Lasič; Stina Oredsson; Savannah C Partridge; Lao H Saal; Daniel Topgaard; Markus Nilsson; Karin Bryskhe
Journal:  NMR Biomed       Date:  2016-02-29       Impact factor: 4.044

9.  Axonal and glial microstructural information obtained with diffusion-weighted magnetic resonance spectroscopy at 7T.

Authors:  Itamar Ronen; Ece Ercan; Andrew Webb
Journal:  Front Integr Neurosci       Date:  2013-03-13

10.  Estimation of Bounded and Unbounded Trajectories in Diffusion MRI.

Authors:  Lipeng Ning; Carl-Fredrik Westin; Yogesh Rathi
Journal:  Front Neurosci       Date:  2016-03-31       Impact factor: 4.677

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