Literature DB >> 19791920

Transport properties of water at functionalized molecular interfaces.

Jun Feng1, Ka-Yiu Wong, Kippi Dyer, B Montgomery Pettitt.   

Abstract

Understanding transport properties of solvent such as diffusion and viscosity at interfaces with biomacromolecules and hard materials is of fundamental importance to both biology and biotechnology. Our study utilizes equilibrium molecular dynamics simulations to calculate solvent transport properties at a model peptide and microarray surface. Both diffusion and selected components of viscosity are considered. Solvent diffusion is found to be affected near the peptide and surface. The stress-stress correlation function of solvent near the hard surface exhibits long time memory. Both diffusion and viscosity are shown to be closely correlated with the density distribution function of water along the microarray surface.

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Year:  2009        PMID: 19791920      PMCID: PMC2766408          DOI: 10.1063/1.3224122

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  21 in total

1.  Individually addressable parallel peptide synthesis on microchips.

Authors:  Jean Philippe Pellois; Xiaochuan Zhou; Onnop Srivannavit; Tiecheng Zhou; Erdogan Gulari; Xiaolian Gao
Journal:  Nat Biotechnol       Date:  2002-07-22       Impact factor: 54.908

2.  Free energy landscapes of encounter complexes in protein-protein association.

Authors:  C J Camacho; Z Weng; S Vajda; C DeLisi
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

3.  Effects of water model and simulation box size on protein diffusional motions.

Authors:  Kazuhiro Takemura; Akio Kitao
Journal:  J Phys Chem B       Date:  2007-09-21       Impact factor: 2.991

4.  Fluctuations, exchange processes, and water diffusion in aqueous protein systems: A study of bovine serum albumin by diverse NMR techniques.

Authors:  R Kimmich; T Gneiting; K Kotitschke; G Schnur
Journal:  Biophys J       Date:  1990-11       Impact factor: 4.033

5.  Layering and position-dependent diffusive dynamics of confined fluids.

Authors:  Jeetain Mittal; Thomas M Truskett; Jeffrey R Errington; Gerhard Hummer
Journal:  Phys Rev Lett       Date:  2008-04-11       Impact factor: 9.161

Review 6.  Structure and reactivity of water at biomaterial surfaces.

Authors:  E A Vogler
Journal:  Adv Colloid Interface Sci       Date:  1998-02       Impact factor: 12.984

Review 7.  Water: now you see it, now you don't.

Authors:  M Levitt; B H Park
Journal:  Structure       Date:  1993-12-15       Impact factor: 5.006

8.  A global model of the protein-solvent interface.

Authors:  V Lounnas; B M Pettitt; G N Phillips
Journal:  Biophys J       Date:  1994-03       Impact factor: 4.033

9.  Peptide conformations for a microarray surface-tethered epitope of the tumor suppressor p53.

Authors:  Jun Feng; Ka-Yiu Wong; Gillian C Lynch; Xiaolian Gao; B Montgomery Pettitt
Journal:  J Phys Chem B       Date:  2007-11-16       Impact factor: 2.991

10.  How protein surfaces induce anomalous dynamics of hydration water.

Authors:  Francesco Pizzitutti; Massimo Marchi; Fabio Sterpone; Peter J Rossky
Journal:  J Phys Chem B       Date:  2007-06-12       Impact factor: 2.991

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  1 in total

1.  Dye diffusion at surfaces: charge matters.

Authors:  Charlisa R Daniels; Carmen Reznik; Christy F Landes
Journal:  Langmuir       Date:  2010-04-06       Impact factor: 3.882

  1 in total

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