Literature DB >> 19787297

Production of isotopically labeled heterologous proteins in non-E. coli prokaryotic and eukaryotic cells.

Hideo Takahashi1, Ichio Shimada.   

Abstract

The preparation of stable isotope-labeled proteins is necessary for the application of a wide variety of NMR methods, to study the structures and dynamics of proteins and protein complexes. The E. coli expression system is generally used for the production of isotope-labeled proteins, because of the advantages of ease of handling, rapid growth, high-level protein production, and low cost for isotope-labeling. However, many eukaryotic proteins are not functionally expressed in E. coli, due to problems related to disulfide bond formation, post-translational modifications, and folding. In such cases, other expression systems are required for producing proteins for biomolecular NMR analyses. In this paper, we review the recent advances in expression systems for isotopically labeled heterologous proteins, utilizing non-E. coli prokaryotic and eukaryotic cells.

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Year:  2009        PMID: 19787297     DOI: 10.1007/s10858-009-9377-0

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  43 in total

1.  Efficient uniform isotope labeling of Abl kinase expressed in Baculovirus-infected insect cells.

Authors:  André Strauss; Francis Bitsch; Gabriele Fendrich; Patrick Graff; René Knecht; Bernd Meyhack; Wolfgang Jahnke
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

Review 2.  Enhancement of soluble protein expression through the use of fusion tags.

Authors:  Dominic Esposito; Deb K Chatterjee
Journal:  Curr Opin Biotechnol       Date:  2006-06-15       Impact factor: 9.740

3.  Structural basis of the collagen-binding mode of discoidin domain receptor 2.

Authors:  Osamu Ichikawa; Masanori Osawa; Noritaka Nishida; Naoki Goshima; Nobuo Nomura; Ichio Shimada
Journal:  EMBO J       Date:  2007-08-16       Impact factor: 11.598

4.  Large-scale expression and purification of the major HIV-1 coreceptor CCR5 and characterization of its interaction with RANTES.

Authors:  Lydia Nisius; Marco Rogowski; Luca Vangelista; Stephan Grzesiek
Journal:  Protein Expr Purif       Date:  2008-06-08       Impact factor: 1.650

5.  Expression of human chorionic gonadotropin uniformly labeled with NMR isotopes in Chinese hamster ovary cells: an advance toward rapid determination of glycoprotein structures.

Authors:  J W Lustbader; S Birken; S Pollak; A Pound; B T Chait; U A Mirza; S Ramnarain; R E Canfield; J M Brown
Journal:  J Biomol NMR       Date:  1996-06       Impact factor: 2.835

6.  Solution NMR spectroscopy of [alpha -15N]lysine-labeled rhodopsin: The single peak observed in both conventional and TROSY-type HSQC spectra is ascribed to Lys-339 in the carboxyl-terminal peptide sequence.

Authors:  J Klein-Seetharaman; P J Reeves; M C Loewen; E V Getmanova; J Chung; H Schwalbe; P E Wright; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

7.  Isotope labeling of mammalian GPCRs in HEK293 cells and characterization of the C-terminus of bovine rhodopsin by high resolution liquid NMR spectroscopy.

Authors:  Karla Werner; Christian Richter; Judith Klein-Seetharaman; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2007-11-13       Impact factor: 2.835

8.  How physiological and cultural conditions influence heterologous protein production in Kluyveromyces lactis.

Authors:  Annamaria Merico; Daniele Capitanio; Ileana Vigentini; Bianca Maria Ranzi; Concetta Compagno
Journal:  J Biotechnol       Date:  2004-04-08       Impact factor: 3.307

9.  Amino acid-selective isotope labeling of proteins for nuclear magnetic resonance study: proteins secreted by Brevibacillus choshinensis.

Authors:  Michikazu Tanio; Rikou Tanaka; Takeshi Tanaka; Toshiyuki Kohno
Journal:  Anal Biochem       Date:  2008-12-25       Impact factor: 3.365

Review 10.  Recombinant protein expression in Pichia pastoris.

Authors:  J M Cregg; J L Cereghino; J Shi; D R Higgins
Journal:  Mol Biotechnol       Date:  2000-09       Impact factor: 2.860

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  17 in total

1.  Isotope labeling in mammalian cells.

Authors:  Arpana Dutta; Krishna Saxena; Harald Schwalbe; Judith Klein-Seetharaman
Journal:  Methods Mol Biol       Date:  2012

2.  Multi-dimensional NMR without coherence transfer: minimizing losses in large systems.

Authors:  Yizhou Liu; James H Prestegard
Journal:  J Magn Reson       Date:  2011-07-21       Impact factor: 2.229

3.  Stable isotope labeling of glycoprotein expressed in silkworms using immunoglobulin G as a test molecule.

Authors:  Hirokazu Yagi; Masatoshi Nakamura; Jun Yokoyama; Ying Zhang; Takumi Yamaguchi; Sachiko Kondo; Jun Kobayashi; Tatsuya Kato; Enoch Y Park; Shiori Nakazawa; Noritaka Hashii; Nana Kawasaki; Koichi Kato
Journal:  J Biomol NMR       Date:  2015-04-23       Impact factor: 2.835

4.  A topical issue: production and labeling of biological macromolecules for NMR investigations.

Authors:  Gerhard Wagner
Journal:  J Biomol NMR       Date:  2010-01       Impact factor: 2.835

5.  Uniform isotope labeling of a eukaryotic seven-transmembrane helical protein in yeast enables high-resolution solid-state NMR studies in the lipid environment.

Authors:  Ying Fan; Lichi Shi; Vladimir Ladizhansky; Leonid S Brown
Journal:  J Biomol NMR       Date:  2011-01-19       Impact factor: 2.835

6.  Affordable uniform isotope labeling with (2)H, (13)C and (15)N in insect cells.

Authors:  Agnieszka Sitarska; Lukasz Skora; Julia Klopp; Susan Roest; César Fernández; Binesh Shrestha; Alvar D Gossert
Journal:  J Biomol NMR       Date:  2015-05-01       Impact factor: 2.835

7.  Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies.

Authors:  Yoshikazu Hattori; Kyoko Furuita; Izuru Ohki; Takahisa Ikegami; Harumi Fukada; Masahiro Shirakawa; Toshimichi Fujiwara; Chojiro Kojima
Journal:  J Biomol NMR       Date:  2012-12-06       Impact factor: 2.835

8.  Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma.

Authors:  Susan E Abbatiello; Birgit Schilling; D R Mani; Lisa J Zimmerman; Steven C Hall; Brendan MacLean; Matthew Albertolle; Simon Allen; Michael Burgess; Michael P Cusack; Mousumi Gosh; Victoria Hedrick; Jason M Held; H Dorota Inerowicz; Angela Jackson; Hasmik Keshishian; Christopher R Kinsinger; John Lyssand; Lee Makowski; Mehdi Mesri; Henry Rodriguez; Paul Rudnick; Pawel Sadowski; Nell Sedransk; Kent Shaddox; Stephen J Skates; Eric Kuhn; Derek Smith; Jeffery R Whiteaker; Corbin Whitwell; Shucha Zhang; Christoph H Borchers; Susan J Fisher; Bradford W Gibson; Daniel C Liebler; Michael J MacCoss; Thomas A Neubert; Amanda G Paulovich; Fred E Regnier; Paul Tempst; Steven A Carr
Journal:  Mol Cell Proteomics       Date:  2015-02-18       Impact factor: 5.911

9.  Yeast-expressed human membrane protein aquaporin-1 yields excellent resolution of solid-state MAS NMR spectra.

Authors:  Sanaz Emami; Ying Fan; Rachel Munro; Vladimir Ladizhansky; Leonid S Brown
Journal:  J Biomol NMR       Date:  2013-01-24       Impact factor: 2.835

10.  Molecular Determinants of Tubulin's C-Terminal Tail Conformational Ensemble.

Authors:  Kathryn P Wall; Maria Pagratis; Geoffrey Armstrong; Jeremy L Balsbaugh; Eric Verbeke; Chad G Pearson; Loren E Hough
Journal:  ACS Chem Biol       Date:  2016-09-28       Impact factor: 5.100

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