Literature DB >> 19773397

TSPY1 copy number variation influences spermatogenesis and shows differences among Y lineages.

Claudia Giachini1, Francesca Nuti, Daniel J Turner, Ilaria Laface, Yali Xue, Fabrice Daguin, Gianni Forti, Chris Tyler-Smith, Csilla Krausz.   

Abstract

CONTEXT: TSPY1 is a tandemly-repeated gene on the human Y chromosome forming an array of approximately 21-35 copies. The testicular expression pattern and the inferred function of the TSPY1 protein suggest possible involvement in spermatogenesis. However, data are scarce on TSPY1 copy number variation in different Y lineages and its role in spermatogenesis.
OBJECTIVES: We sought to define: 1) the extent of TSPY1 copy number variation within and among Y chromosome haplogroups; and 2) the role of TSPY1 dosage in spermatogenic efficiency.
MATERIALS AND METHODS: A total of 154 idiopathic infertile men and 130 normozoospermic controls from Central Italy were analyzed. We used a quantitative PCR assay to measure TSPY1 copy number and also defined Y haplogroups in all subjects.
RESULTS: We provide evidence that TSPY1 copy number shows substantial variation among Y haplogroups and thus that population stratification does represent a potential bias in case-control association studies. We also found: 1) a significant positive correlation between TSPY1 copy number and sperm count (P < 0.001); 2) a significant difference in mean TSPY1 copy number between patients and controls (28.4 +/- 8.3 vs. 33.9 +/- 10.7; P < 0.001); and 3) a 1.5-fold increased risk of abnormal sperm parameters in men with less than 33 copies (P < 0.001).
CONCLUSIONS: TSPY copy number variation significantly influences spermatogenic efficiency. Low TSPY1 copy number is a new risk factor for male infertility with potential clinical consequences.

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Year:  2009        PMID: 19773397      PMCID: PMC3330747          DOI: 10.1210/jc.2009-1029

Source DB:  PubMed          Journal:  J Clin Endocrinol Metab        ISSN: 0021-972X            Impact factor:   5.958


  28 in total

Review 1.  Gonadoblastoma, testicular and prostate cancers, and the TSPY gene.

Authors:  Y F Lau
Journal:  Am J Hum Genet       Date:  1999-04       Impact factor: 11.025

Review 2.  Y chromosome and male infertility: update, 2006.

Authors:  Csilla Krausz; Selene Degl'Innocenti
Journal:  Front Biosci       Date:  2006-09-01

3.  Testis-specific protein, Y-encoded (TSPY) expression in testicular tissues.

Authors:  F Schnieders; T Dörk; J Arnemann; T Vogel; M Werner; J Schmidtke
Journal:  Hum Mol Genet       Date:  1996-11       Impact factor: 6.150

4.  Highly informative compound haplotypes for the human Y chromosome.

Authors:  N Mathias; M Bayés; C Tyler-Smith
Journal:  Hum Mol Genet       Date:  1994-01       Impact factor: 6.150

5.  A Cre gene directed by a human TSPY promoter is specific for germ cells and neurons.

Authors:  Tatsuo Kido; Yun-Fai Chris Lau
Journal:  Genesis       Date:  2005-08       Impact factor: 2.487

6.  A human Y-chromosomal DNA sequence expressed in testicular tissue.

Authors:  J Arnemann; J T Epplen; H J Cooke; U Sauermann; W Engel; J Schmidtke
Journal:  Nucleic Acids Res       Date:  1987-11-11       Impact factor: 16.971

7.  Partial AZFc deletions and duplications: clinical correlates in the Italian population.

Authors:  Claudia Giachini; Ilaria Laface; Elena Guarducci; Giancarlo Balercia; Gianni Forti; Csilla Krausz
Journal:  Hum Genet       Date:  2008-09-21       Impact factor: 4.132

8.  Structural variation on the short arm of the human Y chromosome: recurrent multigene deletions encompassing Amelogenin Y.

Authors:  Mark A Jobling; Iek Chi C Lo; Daniel J Turner; Georgina R Bowden; Andrew C Lee; Yali Xue; Denise Carvalho-Silva; Matthew E Hurles; Susan M Adams; Yuet Meng Chang; Thirsa Kraaijenbrink; Jürgen Henke; Ginevra Guanti; Brian McKeown; Roland A H van Oorschot; R John Mitchell; Peter de Knijff; Chris Tyler-Smith; Emma J Parkin
Journal:  Hum Mol Genet       Date:  2006-12-22       Impact factor: 6.150

9.  Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language.

Authors:  Z H Rosser; T Zerjal; M E Hurles; M Adojaan; D Alavantic; A Amorim; W Amos; M Armenteros; E Arroyo; G Barbujani; G Beckman; L Beckman; J Bertranpetit; E Bosch; D G Bradley; G Brede; G Cooper; H B Côrte-Real; P de Knijff; R Decorte; Y E Dubrova; O Evgrafov; A Gilissen; S Glisic; M Gölge; E W Hill; A Jeziorowska; L Kalaydjieva; M Kayser; T Kivisild; S A Kravchenko; A Krumina; V Kucinskas; J Lavinha; L A Livshits; P Malaspina; S Maria; K McElreavey; T A Meitinger; A V Mikelsaar; R J Mitchell; K Nafa; J Nicholson; S Nørby; A Pandya; J Parik; P C Patsalis; L Pereira; B Peterlin; G Pielberg; M J Prata; C Previderé; L Roewer; S Rootsi; D C Rubinsztein; J Saillard; F R Santos; G Stefanescu; B C Sykes; A Tolun; R Villems; C Tyler-Smith; M A Jobling
Journal:  Am J Hum Genet       Date:  2000-11-09       Impact factor: 11.043

10.  Analysis of the largest tandemly repeated DNA families in the human genome.

Authors:  Peter E Warburton; Dan Hasson; Flavia Guillem; Chloe Lescale; Xiaoping Jin; Gyorgy Abrusan
Journal:  BMC Genomics       Date:  2008-11-07       Impact factor: 3.969

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  32 in total

Review 1.  Genetic causes of spermatogenic failure.

Authors:  Annelien Massart; Willy Lissens; Herman Tournaye; Katrien Stouffs
Journal:  Asian J Androl       Date:  2011-12-05       Impact factor: 3.285

2.  Y-chromosome polymorphisms of the domestic Bactrian camel in China.

Authors:  Huiling Chen; Zhanjun Ren; Jiping Zhao; Chengdong Zhang; Xuejiao Yang
Journal:  J Genet       Date:  2018-03       Impact factor: 1.166

Review 3.  Human Y-chromosome variation in the genome-sequencing era.

Authors:  Mark A Jobling; Chris Tyler-Smith
Journal:  Nat Rev Genet       Date:  2017-05-30       Impact factor: 53.242

Review 4.  Structural variation of the human genome: mechanisms, assays, and role in male infertility.

Authors:  Claudia M B Carvalho; Feng Zhang; James R Lupski
Journal:  Syst Biol Reprod Med       Date:  2011-01-06       Impact factor: 3.061

Review 5.  Spermatogenic failure and the Y chromosome.

Authors:  C Krausz; E Casamonti
Journal:  Hum Genet       Date:  2017-04-29       Impact factor: 4.132

Review 6.  The Y chromosome-linked copy number variations and male fertility.

Authors:  C Krausz; C Chianese; C Giachini; E Guarducci; I Laface; G Forti
Journal:  J Endocrinol Invest       Date:  2011-03-21       Impact factor: 4.256

7.  Selection Has Countered High Mutability to Preserve the Ancestral Copy Number of Y Chromosome Amplicons in Diverse Human Lineages.

Authors:  Levi S Teitz; Tatyana Pyntikova; Helen Skaletsky; David C Page
Journal:  Am J Hum Genet       Date:  2018-08-02       Impact factor: 11.025

8.  ZNF280BY and ZNF280AY: autosome derived Y-chromosome gene families in Bovidae.

Authors:  Yang Yang; Ti-Cheng Chang; Hiroshi Yasue; Arvind K Bharti; Ernest F Retzel; Wan-Sheng Liu
Journal:  BMC Genomics       Date:  2011-01-07       Impact factor: 3.969

9.  Absolute copy number differences of Y chromosomal genes between crossbred (Bos taurus × Bos indicus) and Indicine bulls.

Authors:  Ayan Mukherjee; Gulshan Dass; Jagan Mohanarao G; Moloya Gohain; Biswajit Brahma; Tirtha Kumar Datta; Sachinandan De
Journal:  J Anim Sci Biotechnol       Date:  2013-04-04

10.  Novel insights into DNA methylation features in spermatozoa: stability and peculiarities.

Authors:  Csilla Krausz; Juan Sandoval; Sergi Sayols; Chiara Chianese; Claudia Giachini; Holger Heyn; Manel Esteller
Journal:  PLoS One       Date:  2012-10-02       Impact factor: 3.240

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