Literature DB >> 19760441

Biotechnological strains of Komagataella (Pichia) pastoris are Komagataella phaffii as determined from multigene sequence analysis.

Cletus Paul Kurtzman1.   

Abstract

Pichia pastoris was reassigned earlier to the genus Komagataella following phylogenetic analysis of gene sequences. Since that time, two additional species of Komagataella have been described, K. pseudopastoris and K. phaffii. Because these three species are unlikely to be resolved from the standard fermentation and growth tests used in yeast taxonomy, the identity of biotechnologically important strains of K. pastoris was determined from multigene sequence analyses. Results from this study show that the strain of 'Pichia pastoris' commonly used in gene expression studies is actually K. phaffii.

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Year:  2009        PMID： 19760441     DOI： 10.1007/s10295-009-0638-4

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN： 1367-5435            Impact factor:   3.346


  9 in total

1.  Phylogenetic relationships among species of Pichia, Issatchenkia and Williopsis determined from multigene sequence analysis, and the proposal of Barnettozyma gen. nov., Lindnera gen. nov. and Wickerhamomyces gen. nov.

Authors:  Cletus P Kurtzman; Christie J Robnett; Eleanor Basehoar-Powers
Journal:  FEMS Yeast Res       Date:  2008-07-30       Impact factor: 2.796

2.  Description of Komagataella phaffii sp. nov. and the transfer of Pichia pseudopastoris to the methylotrophic yeast genus Komagataella.

Authors:  Cletus P Kurtzman
Journal:  Int J Syst Evol Microbiol       Date:  2005-03       Impact factor: 2.747

3.  Pichia (Komagataella) pseudopastoris sp. nov., a new yeast species from Hungary.

Authors:  Dénes Dlauchy; Judit Tornai-Lehoczki; László Fülöp; Gábor Péter
Journal:  Antonie Van Leeuwenhoek       Date:  2003       Impact factor: 2.271

4.  Synonomy of the yeast genera Hansenula and Pichia demonstrated through comparisons of deoxyribonucleic acid relatedness.

Authors:  C P Kurtzman
Journal:  Antonie Van Leeuwenhoek       Date:  1984       Impact factor: 2.271

5.  Phylogenetic relationships among yeasts of the 'Saccharomyces complex' determined from multigene sequence analyses.

Authors:  Cletus P Kurtzman; Christie J Robnett
Journal:  FEMS Yeast Res       Date:  2003-06       Impact factor: 2.796

6.  Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences.

Authors:  C P Kurtzman; C J Robnett
Journal:  Antonie Van Leeuwenhoek       Date:  1998-05       Impact factor: 2.271

7.  The phylogenetic relationships of the hat-shaped ascospore-forming, nitrate-assimilating Pichia species, formerly classified in the genus Hansenula Sydow et Sydow, based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae): the proposals of three new genera, Ogataea, Kuraishia, and Nakazawaea.

Authors:  Y Yamada; K Maeda; K Mikata
Journal:  Biosci Biotechnol Biochem       Date:  1994-07       Impact factor: 2.043

8.  The phylogenetic relationships of methanol-assimilating yeasts based on the partial sequences of 18S and 26S ribosomal RNAs: the proposal of Komagataella gen. nov. (Saccharomycetaceae).

Authors:  Y Yamada; M Matsuda; K Maeda; K Mikata
Journal:  Biosci Biotechnol Biochem       Date:  1995-03       Impact factor: 2.043

Review 9.  Recent advances in the expression of foreign genes in Pichia pastoris.

Authors:  J M Cregg; T S Vedvick; W C Raschke
Journal:  Biotechnology (N Y)       Date:  1993-08
  9 in total
  45 in total

1.  Mating-type switching by chromosomal inversion in methylotrophic yeasts suggests an origin for the three-locus Saccharomyces cerevisiae system.

Authors:  Sara J Hanson; Kevin P Byrne; Kenneth H Wolfe
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-27       Impact factor: 11.205

2.  Recombinant Inga Laurina Trypsin Inhibitor (ILTI) Production in Komagataella Phaffii Confirms Its Potential Anti-Biofilm Effect and Reveals an Anti-Tumoral Activity.

Authors:  Fábio C Carneiro; Simone S Weber; Osmar N Silva; Ana Cristina Jacobowski; Marcelo H S Ramada; Maria L R Macedo; Octávio L Franco; Nádia S Parachin
Journal:  Microorganisms       Date:  2018-04-28

Review 3.  Refined Pichia pastoris reference genome sequence.

Authors:  Lukas Sturmberger; Thomas Chappell; Martina Geier; Florian Krainer; Kasey J Day; Ursa Vide; Sara Trstenjak; Anja Schiefer; Toby Richardson; Leah Soriaga; Barbara Darnhofer; Ruth Birner-Gruenberger; Benjamin S Glick; Ilya Tolstorukov; James Cregg; Knut Madden; Anton Glieder
Journal:  J Biotechnol       Date:  2016-04-12       Impact factor: 3.307

4.  The Methylotroph Gene Order Browser (MGOB) reveals conserved synteny and ancestral centromere locations in the yeast family Pichiaceae.

Authors:  Alexander P Douglass; Kevin P Byrne; Kenneth H Wolfe
Journal:  FEMS Yeast Res       Date:  2019-09-01       Impact factor: 2.796

Review 5.  Production of protein-based polymers in Pichia pastoris.

Authors:  Marc W T Werten; Gerrit Eggink; Martien A Cohen Stuart; Frits A de Wolf
Journal:  Biotechnol Adv       Date:  2019-03-19       Impact factor: 14.227

6.  Crystal structure of linoleate 13R-manganese lipoxygenase in complex with an adhesion protein.

Authors:  Yang Chen; Anneli Wennman; Saeid Karkehabadi; Åke Engström; Ernst H Oliw
Journal:  J Lipid Res       Date:  2016-06-15       Impact factor: 5.922

Review 7.  Production of Industrial Enzymes via Pichia pastoris as a Cell Factory in Bioreactor: Current Status and Future Aspects.

Authors:  Zeynep Efsun Duman-Özdamar; Barış Binay
Journal:  Protein J       Date:  2021-02-15       Impact factor: 2.371

Review 8.  Radio Signals from Live Cells: The Coming of Age of In-Cell Solution NMR.

Authors:  Enrico Luchinat; Matteo Cremonini; Lucia Banci
Journal:  Chem Rev       Date:  2022-01-21       Impact factor: 72.087

9.  Genome sequence and analysis of methylotrophic yeast Hansenula polymorpha DL1.

Authors:  Nikolai V Ravin; Michael A Eldarov; Vitaly V Kadnikov; Alexey V Beletsky; Jessica Schneider; Eugenia S Mardanova; Elena M Smekalova; Maria I Zvereva; Olga A Dontsova; Andrey V Mardanov; Konstantin G Skryabin
Journal:  BMC Genomics       Date:  2013-11-27       Impact factor: 3.969

10.  Combined strategies for improving expression of Citrobacter amalonaticus phytase in Pichia pastoris.

Authors:  Cheng Li; Ying Lin; Xueyun Zheng; Nuo Pang; Xihao Liao; Xiaoxiao Liu; Yuanyuan Huang; Shuli Liang
Journal:  BMC Biotechnol       Date:  2015-09-26       Impact factor: 2.563
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