Literature DB >> 7765249

The phylogenetic relationships of the hat-shaped ascospore-forming, nitrate-assimilating Pichia species, formerly classified in the genus Hansenula Sydow et Sydow, based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae): the proposals of three new genera, Ogataea, Kuraishia, and Nakazawaea.

Y Yamada1, K Maeda, K Mikata.   

Abstract

The twenty-seven strains of the hat-shaped ascospore-forming, nitrate-assimilating species, formerly classified in the genus Hansenula, of the genus Pichia were examined for their 18S and 26S rRNA partial base sequencings. All the strains examined were separate phylogenetically from the type strain of P. membranaefaciens (type species of genus Pichia). Based on the sequence data obtained [by number of base differences (five or more) with P. anomala and base sequences on fingerprint segment] in the 18S rRNA partial base sequences, these species were divided into seven groups. Group I, including P. anomala (identical to H. anomala, type species of genus Hansenula), P. canadensis, P. muscicola, P. silvicola, P. subpelliculosa, P. americana, P. bimundalis, P. ciferrii, P. syndowiorum, P. bispora, and P. fabianii, corresponded to the genus Hansenula Sydow et Sydow. Groups II and III were comprised of P. capsulata and P. holstii, respectively. Group IV included P. angusta, P. minuta var. minuta, P. minuta var. nonfermentans, P. philodendra, P. glucozyma, and P. henricii. Groups V, VI, and VII included P. jadinii, P. petersonii, and P. dryadoides, respectively. The nitrate assimilation-negative species, P. wickerhamii was phylogenetically distant from P. membranaefaciens. The seven groupings are discussed phylogenetically and taxonomically. For Groups IV, II, and III, the three new genera were proposed as Ogataea, Kuraishia, and Nakazawaea, respectively, with the type species, O. minuta (identical to P. minuta), K. capsulata (identical to P. capsulata), and N. holstii (identical to P. holstii).

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Year:  1994        PMID: 7765249     DOI: 10.1271/bbb.58.1245

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  10 in total

1.  Production and cleavage of a fusion protein of porcine trypsinogen and enhanced green fluorescent protein (EGFP) in Pichia pastoris.

Authors:  Hana Raschmanová; Leona Paulová; Barbora Branská; Zdeněk Knejzlík; Karel Melzoch; Karin Kovar
Journal:  Folia Microbiol (Praha)       Date:  2018-06-05       Impact factor: 2.099

2.  Methanol-inducible promoter of thermotolerant methylotrophic yeast Ogataea thermomethanolica BCC16875 potential for production of heterologous protein at high temperatures.

Authors:  Peerada Promdonkoy; Witoon Tirasophon; Niran Roongsawang; Lily Eurwilaichitr; Sutipa Tanapongpipat
Journal:  Curr Microbiol       Date:  2014-03-27       Impact factor: 2.188

3.  Nakazawaea odontotermitis f.a., sp. nov., a novel yeast isolated from the gut of Odontotermes horni in India.

Authors:  Snigdha Tiwari; Bhaskar C Behera; Abhishek Baghela
Journal:  Arch Microbiol       Date:  2022-04-02       Impact factor: 2.552

4.  Integrative transformation system for the metabolic engineering of the sphingoid base-producing yeast Pichia ciferrii.

Authors:  Jung-Hoon Bae; Jung-Hoon Sohn; Chang-Seo Park; Joon-Shick Rhee; Eui-Sung Choi
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

5.  Biotechnological strains of Komagataella (Pichia) pastoris are Komagataella phaffii as determined from multigene sequence analysis.

Authors:  Cletus Paul Kurtzman
Journal:  J Ind Microbiol Biotechnol       Date:  2009-11       Impact factor: 3.346

6.  Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).

Authors:  Lucia Morales; Benjamin Noel; Betina Porcel; Marina Marcet-Houben; Marie-Francoise Hullo; Christine Sacerdot; Fredj Tekaia; Véronique Leh-Louis; Laurence Despons; Varun Khanna; Jean-Marc Aury; Valérie Barbe; Arnaud Couloux; Karen Labadie; Eric Pelletier; Jean-Luc Souciet; Teun Boekhout; Toni Gabaldon; Patrick Wincker; Bernard Dujon
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

7.  Early Ongoing Speciation of Ogataea uvarum Sp. Nov. Within the Grape Ecosystem Revealed by the Internal Variability Among the rDNA Operon Repeats.

Authors:  Luca Roscini; Mariana Tristezza; Laura Corte; Claudia Colabella; Carla Perrotta; Patrizia Rampino; Vincent Robert; Duong Vu; Gianluigi Cardinali; Francesco Grieco
Journal:  Front Microbiol       Date:  2018-08-03       Impact factor: 5.640

8.  Genome editing in Kluyveromyces and Ogataea yeasts using a broad-host-range Cas9/gRNA co-expression plasmid.

Authors:  Hannes Juergens; Javier A Varela; Arthur R Gorter de Vries; Thomas Perli; Veronica J M Gast; Nikola Y Gyurchev; Arun S Rajkumar; Robert Mans; Jack T Pronk; John P Morrissey; Jean-Marc G Daran
Journal:  FEMS Yeast Res       Date:  2018-05-01       Impact factor: 2.796

9.  Genomic diversity, chromosomal rearrangements, and interspecies hybridization in the Ogataea polymorpha species complex.

Authors:  Sara J Hanson; Eoin Ó Cinnéide; Letal I Salzberg; Kenneth H Wolfe; Jamie McGowan; David A Fitzpatrick; Kate Matlin
Journal:  G3 (Bethesda)       Date:  2021-08-07       Impact factor: 3.154

10.  Amiodarone induces cell wall channel formation in yeast Hansenula polymorpha.

Authors:  Tatyana S Kalebina; Sviatoslav S Sokolov; Irina O Selyakh; Darya P Vanichkina; Fedor F Severin
Journal:  Springerplus       Date:  2015-08-26
  10 in total

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