Literature DB >> 19759832

DETECTING DYNAMIC AND GENETIC EFFECTS ON BRAIN STRUCTURE USING HIGH-DIMENSIONAL CORTICAL PATTERN MATCHING.

Paul M Thompson1, Kiralee M Hayashi, Greig de Zubicaray, Andrew L Janke, Stephen E Rose, James Semple, David M Doddrell, Tyrone D Cannon, Arthur W Toga.   

Abstract

We briefly describe a set of algorithms to detect and visualize effects of disease and genetic factors on the brain. Extreme variations in cortical anatomy, even among normal subjects, complicate the detection and mapping of systematic effects on brain structure in human populations. We tackle this problem in two stages. First, we develop a cortical pattern matching approach, based on metrically covariant partial differential equations (PDEs), to associate corresponding regions of cortex in an MRI brain image database (N=102 scans). Second, these high-dimensional deformation maps are used to transfer within-subject cortical signals, including measures of gray matter distribution, shape asymmetries, and degenerative rates, to a common anatomic template for statistical analysis. We illustrate these techniques in two applications: (1) mapping dynamic patterns of gray matter loss in longitudinally scanned Alzheimer's disease patients; and (2) mapping genetic influences on brain structure. We extend statistics used widely in behavioral genetics to cortical manifolds. Specifically, we introduce methods based on h-squared distributed random fields to map hereditary influences on brain structure in human populations.

Entities:  

Year:  2002        PMID: 19759832      PMCID: PMC2744079          DOI: 10.1109/ISBI.2002.1029297

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  12 in total

1.  Mathematical/computational challenges in creating deformable and probabilistic atlases of the human brain.

Authors:  P M Thompson; R P Woods; M S Mega; A W Toga
Journal:  Hum Brain Mapp       Date:  2000-02       Impact factor: 5.038

2.  High-resolution intersubject averaging and a coordinate system for the cortical surface.

Authors:  B Fischl; M I Sereno; R B Tootell; A M Dale
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

3.  Genetic influences on brain structure.

Authors:  P M Thompson; T D Cannon; K L Narr; T van Erp; V P Poutanen; M Huttunen; J Lönnqvist; C G Standertskjöld-Nordenstam; J Kaprio; M Khaledy; R Dail; C I Zoumalan; A W Toga
Journal:  Nat Neurosci       Date:  2001-12       Impact factor: 24.884

4.  Mapping adolescent brain change reveals dynamic wave of accelerated gray matter loss in very early-onset schizophrenia.

Authors:  P M Thompson; C Vidal; J N Giedd; P Gochman; J Blumenthal; R Nicolson; A W Toga; J L Rapoport
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

Review 5.  On the metrics and euler-lagrange equations of computational anatomy.

Authors:  Michael I Miller; Alain Trouve; Laurent Younes
Journal:  Annu Rev Biomed Eng       Date:  2002-03-22       Impact factor: 9.590

6.  Deformable templates using large deformation kinematics.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  IEEE Trans Image Process       Date:  1996       Impact factor: 10.856

7.  4D deformation modeling of cortical disease progression in Alzheimer's dementia.

Authors:  A L Janke; G de Zubicaray; S E Rose; M Griffin; J B Chalk; G J Galloway
Journal:  Magn Reson Med       Date:  2001-10       Impact factor: 4.668

8.  Growth patterns in the developing brain detected by using continuum mechanical tensor maps.

Authors:  P M Thompson; J N Giedd; R P Woods; D MacDonald; A C Evans; A W Toga
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

9.  Voxel-based morphometry using the RAVENS maps: methods and validation using simulated longitudinal atrophy.

Authors:  C Davatzikos; A Genc; D Xu; S M Resnick
Journal:  Neuroimage       Date:  2001-12       Impact factor: 6.556

10.  A surface-based technique for warping three-dimensional images of the brain.

Authors:  P Thompson; A W Toga
Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

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  7 in total

1.  CORTICAL SURFACE PARAMETERIZATION BY P-HARMONIC ENERGY MINIMIZATION.

Authors:  Anand A Joshi; David W Shattuck; Paul M Thompson; Richard M Leahy
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2004-04-01

2.  A framework for registration, statistical characterization and classification of cortically constrained functional imaging data.

Authors:  Anand A Joshi; David W Shattuck; Paul M Thompson; Richard M Leahy
Journal:  Inf Process Med Imaging       Date:  2005

3.  Surface-constrained volumetric brain registration using harmonic mappings.

Authors:  Anand A Joshi; David W Shattuck; Paul M Thompson; Richard M Leahy
Journal:  IEEE Trans Med Imaging       Date:  2007-12       Impact factor: 10.048

4.  Inferring brain variability from diffeomorphic deformations of currents: an integrative approach.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Paul Thompson; Nicholas Ayache
Journal:  Med Image Anal       Date:  2008-06-21       Impact factor: 8.545

5.  Using the Anisotropic Laplace Equation to Compute Cortical Thickness.

Authors:  Anand A Joshi; Chitresh Bhushan; Ronald Salloum; Jessica Wisnowski; David W Shattuck; Richard M Leahy
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

6.  Sulcal set optimization for cortical surface registration.

Authors:  Anand A Joshi; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; David W Shattuck; Arthur W Toga; Richard M Leahy
Journal:  Neuroimage       Date:  2010-01-04       Impact factor: 6.556

7.  Combined volumetric and surface registration.

Authors:  Gheorghe Postelnicu; Lilla Zollei; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2008-08-15       Impact factor: 10.048

  7 in total

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