Literature DB >> 19273000

Combined volumetric and surface registration.

Gheorghe Postelnicu1, Lilla Zollei, Bruce Fischl.   

Abstract

In this paper, we propose a novel method for the registration of volumetric images of the brain that optimizes the alignment of both cortical and subcortical structures. In order to achieve this, relevant geometrical information is extracted from a surface-based morph and diffused into the volume using the Navier operator of elasticity, resulting in a volumetric warp that aligns cortical folding patterns. This warp field is then refined with an intensity driven optical flow procedure that registers noncortical regions, while preserving the cortical alignment. The result is a combined surface and volume morph (CVS) that accurately registers both cortical and subcortical regions, establishing a single coordinate system suitable for the entire brain.

Entities:  

Mesh:

Year:  2008        PMID: 19273000      PMCID: PMC2761957          DOI: 10.1109/TMI.2008.2004426

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  30 in total

Review 1.  A survey of medical image registration.

Authors:  J B Maintz; M A Viergever
Journal:  Med Image Anal       Date:  1998-03       Impact factor: 8.545

2.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

3.  Registration of 3-D intraoperative MR images of the brain using a finite-element biomechanical model.

Authors:  M Ferrant; A Nabavi; B Macq; F A Jolesz; R Kikinis; S K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

4.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

5.  Spatial transformation and registration of brain images using elastically deformable models.

Authors:  C Davatzikos
Journal:  Comput Vis Image Underst       Date:  1997-05       Impact factor: 3.876

6.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

7.  Brain image registration using cortically constrained harmonic mappings.

Authors:  Anand Joshi; David Shattuck; Paul Thompson; Richard Leahy
Journal:  Inf Process Med Imaging       Date:  2007

8.  Geometrically accurate topology-correction of cortical surfaces using nonseparating loops.

Authors:  Florent Ségonne; Jenni Pacheco; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

9.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data.

Authors:  J G Sled; A P Zijdenbos; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-02       Impact factor: 10.048

10.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

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  58 in total

1.  Segmentation of image ensembles via latent atlases.

Authors:  Tammy Riklin-Raviv; Koen Van Leemput; Bjoern H Menze; William M Wells; Polina Golland
Journal:  Med Image Anal       Date:  2010-06-04       Impact factor: 8.545

2.  POSTURE MATCHING AND ELASTIC REGISTRATION OF A MOUSE ATLAS TO SURFACE TOPOGRAPHY RANGE DATA.

Authors:  A A Joshi; A J Chaudhari; Changqing Li; D W Shattuck; J Dutta; R M Leahy; A W Toga
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2009-08-07

3.  TRActs constrained by UnderLying INfant anatomy (TRACULInA): An automated probabilistic tractography tool with anatomical priors for use in the newborn brain.

Authors:  Lilla Zöllei; Camilo Jaimes; Elie Saliba; P Ellen Grant; Anastasia Yendiki
Journal:  Neuroimage       Date:  2019-05-24       Impact factor: 6.556

4.  Whole brain diffeomorphic metric mapping via integration of sulcal and gyral curves, cortical surfaces, and images.

Authors:  Jia Du; Laurent Younes; Anqi Qiu
Journal:  Neuroimage       Date:  2011-01-31       Impact factor: 6.556

5.  Deformable registration of glioma images using EM algorithm and diffusion reaction modeling.

Authors:  Ali Gooya; George Biros; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2010-09-27       Impact factor: 10.048

Review 6.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

7.  A surface-based analysis of language lateralization and cortical asymmetry.

Authors:  Douglas N Greve; Lise Van der Haegen; Qing Cai; Steven Stufflebeam; Mert R Sabuncu; Bruce Fischl; Marc Brysbaert
Journal:  J Cogn Neurosci       Date:  2013-04-22       Impact factor: 3.225

8.  A framework for brain registration via simultaneous surface and volume flow.

Authors:  Anand Joshi; Richard Leahy; Arthur W Toga; David Shattuck
Journal:  Inf Process Med Imaging       Date:  2009

9.  Structural Connectivity Fingerprints Predict Cortical Selectivity for Multiple Visual Categories across Cortex.

Authors:  David E Osher; Rebecca R Saxe; Kami Koldewyn; John D E Gabrieli; Nancy Kanwisher; Zeynep M Saygin
Journal:  Cereb Cortex       Date:  2015-01-26       Impact factor: 5.357

10.  Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.

Authors:  Satrajit S Ghosh; Sita Kakunoori; Jean Augustinack; Alfonso Nieto-Castanon; Ioulia Kovelman; Nadine Gaab; Joanna A Christodoulou; Christina Triantafyllou; John D E Gabrieli; Bruce Fischl
Journal:  Neuroimage       Date:  2010-06-04       Impact factor: 6.556

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