Literature DB >> 19759015

Structure and interdomain dynamics of apoptosis-associated speck-like protein containing a CARD (ASC).

Eva de Alba1.   

Abstract

The human protein ASC is a key mediator in apoptosis and inflammation. Through its two death domains (pyrin and CARD) ASC interacts with cell death executioners, acts as an essential adapter for inflammasome integrity, and oligomerizes into functional supramolecular assemblies. However, these functions are not understood at the structural-dynamic level. This study reports the solution structure and interdomain dynamics of full-length ASC. The pyrin and CARD domains are structurally independent six-helix bundle motifs connected by a 23-residue linker. The CARD structure reveals two distinctive characteristics; helix 1 is not fragmented as in all other known CARDs, and its electrostatic surface shows a uniform distribution of positive and negative charges, whereas these are commonly separated into two areas in other death domains. The linker adopts residual structure resulting in a back-to-back orientation of the domains, which avoids steric interference of each domain with the binding site of the other. NMR relaxation experiments show that the linker is flexible despite the residual structure. This flexibility could help expand the relative volume occupied by each domain, thus increasing the capture radius for effectors. Based on the ASC structure, a tentative model is proposed to illustrate how ASC oligomerizes via CARD and pyrin homophilic interactions. Moreover, ASC oligomers have been analyzed by atomic force microscopy, showing a predominant species of disk-like particles of approximately 12-nm diameter and approximately 1-nm height. Taken together, these results provide structural insight into the behavior of ASC as an adapter molecule.

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Year:  2009        PMID: 19759015      PMCID: PMC2781708          DOI: 10.1074/jbc.M109.024273

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  58 in total

1.  ASC, a novel 22-kDa protein, aggregates during apoptosis of human promyelocytic leukemia HL-60 cells.

Authors:  J Masumoto; S Taniguchi; K Ayukawa; H Sarvotham; T Kishino; N Niikawa; E Hidaka; T Katsuyama; T Higuchi; J Sagara
Journal:  J Biol Chem       Date:  1999-11-26       Impact factor: 5.157

2.  Speeding molecular recognition by using the folding funnel: the fly-casting mechanism.

Authors:  B A Shoemaker; J J Portman; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

3.  Structure and dynamics of ASC2, a pyrin domain-only protein that regulates inflammatory signaling.

Authors:  Aswin Natarajan; Ranajeet Ghose; Justine M Hill
Journal:  J Biol Chem       Date:  2006-08-10       Impact factor: 5.157

Review 4.  The death domain superfamily in intracellular signaling of apoptosis and inflammation.

Authors:  Hyun Ho Park; Yu-Chih Lo; Su-Chang Lin; Liwei Wang; Jin Kuk Yang; Hao Wu
Journal:  Annu Rev Immunol       Date:  2007       Impact factor: 28.527

5.  The pyroptosome: a supramolecular assembly of ASC dimers mediating inflammatory cell death via caspase-1 activation.

Authors:  T Fernandes-Alnemri; J Wu; J-W Yu; P Datta; B Miller; W Jankowski; S Rosenberg; J Zhang; E S Alnemri
Journal:  Cell Death Differ       Date:  2007-06-29       Impact factor: 15.828

6.  Solution structure of NOD1 CARD and mutational analysis of its interaction with the CARD of downstream kinase RICK.

Authors:  Florence Manon; Adrien Favier; Gabriel Núñez; Jean-Pierre Simorre; Stephen Cusack
Journal:  J Mol Biol       Date:  2006-09-29       Impact factor: 5.469

7.  Mechanism of ASC-mediated apoptosis: bid-dependent apoptosis in type II cells.

Authors:  M Hasegawa; K Kawase; N Inohara; R Imamura; W-C Yeh; T Kinoshita; T Suda
Journal:  Oncogene       Date:  2006-09-11       Impact factor: 9.867

Review 8.  ASC, Ipaf and Cryopyrin/Nalp3: bona fide intracellular adapters of the caspase-1 inflammasome.

Authors:  Sanjeev Mariathasan
Journal:  Microbes Infect       Date:  2007-01-27       Impact factor: 2.700

9.  Reconstituted NALP1 inflammasome reveals two-step mechanism of caspase-1 activation.

Authors:  Benjamin Faustin; Lydia Lartigue; Jean-Marie Bruey; Frederic Luciano; Eduard Sergienko; Beatrice Bailly-Maitre; Niels Volkmann; Dorit Hanein; Isabelle Rouiller; John C Reed
Journal:  Mol Cell       Date:  2007-03-09       Impact factor: 17.970

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

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  56 in total

Review 1.  Activation and assembly of the inflammasomes through conserved protein domain families.

Authors:  Tengchuan Jin; Tsan Sam Xiao
Journal:  Apoptosis       Date:  2015-02       Impact factor: 4.677

2.  Polypeptide modulators of caspase recruitment domain (CARD)-CARD-mediated protein-protein interactions.

Authors:  Yadira Palacios-Rodríguez; Guillermo García-Laínez; Mónica Sancho; Anna Gortat; Mar Orzáez; Enrique Pérez-Payá
Journal:  J Biol Chem       Date:  2011-11-07       Impact factor: 5.157

3.  Three-dimensional structure of the NLRP7 pyrin domain: insight into pyrin-pyrin-mediated effector domain signaling in innate immunity.

Authors:  Anderson S Pinheiro; Martina Proell; Clarissa Eibl; Rebecca Page; Robert Schwarzenbacher; Wolfgang Peti
Journal:  J Biol Chem       Date:  2010-06-11       Impact factor: 5.157

4.  Structure and assembly of the mouse ASC inflammasome by combined NMR spectroscopy and cryo-electron microscopy.

Authors:  Lorenzo Sborgi; Francesco Ravotti; Venkata P Dandey; Mathias S Dick; Adam Mazur; Sina Reckel; Mohamed Chami; Sebastian Scherer; Matthias Huber; Anja Böckmann; Edward H Egelman; Henning Stahlberg; Petr Broz; Beat H Meier; Sebastian Hiller
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-13       Impact factor: 11.205

5.  Allosteric Dynamic Control of Binding.

Authors:  Fidan Sumbul; Saliha Ece Acuner-Ozbabacan; Turkan Haliloglu
Journal:  Biophys J       Date:  2015-08-31       Impact factor: 4.033

6.  ASC Pyrin Domain Self-associates and Binds NLRP3 Protein Using Equivalent Binding Interfaces.

Authors:  Javier Oroz; Susana Barrera-Vilarmau; Carlos Alfonso; Germán Rivas; Eva de Alba
Journal:  J Biol Chem       Date:  2016-07-18       Impact factor: 5.157

Review 7.  Inhibiting the inflammasome: one domain at a time.

Authors:  Andrea Dorfleutner; Lan Chu; Christian Stehlik
Journal:  Immunol Rev       Date:  2015-05       Impact factor: 12.988

Review 8.  Inflammasomes in intestinal inflammation and cancer.

Authors:  Grace Y Chen; Gabriel Núñez
Journal:  Gastroenterology       Date:  2011-10-15       Impact factor: 22.682

9.  Functional and structural characterization of zebrafish ASC.

Authors:  Yajuan Li; Yi Huang; Xiaocong Cao; Xueying Yin; Xiangyu Jin; Sheng Liu; Jiansheng Jiang; Wei Jiang; Tsan Sam Xiao; Rongbin Zhou; Gang Cai; Bing Hu; Tengchuan Jin
Journal:  FEBS J       Date:  2018-06-14       Impact factor: 5.542

10.  Structure of the absent in melanoma 2 (AIM2) pyrin domain provides insights into the mechanisms of AIM2 autoinhibition and inflammasome assembly.

Authors:  Tengchuan Jin; Andrew Perry; Patrick Smith; Jiansheng Jiang; T Sam Xiao
Journal:  J Biol Chem       Date:  2013-03-25       Impact factor: 5.157

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