Literature DB >> 19756582

Aptamers and riboswitches: perspectives in biotechnology.

Julia E Weigand1, Beatrix Suess.   

Abstract

Aptamers are short, single stranded nucleic acids which bind a wide range of different ligands with extraordinary high binding affinity and specificity. The steadily increasing number of aptamers is accompanied by an expanding range of applications in biotechnology. We will describe new developments in the field including the use of aptamers for conditional gene regulation and as biosensors. In addition, we will discuss the potential of aptamers as tags to visualize RNA and protein distribution in living cells and as therapeutics. Furthermore, we will consider biotechnological applications of riboswitches for gene regulation and as drug target.

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Year:  2009        PMID: 19756582     DOI: 10.1007/s00253-009-2194-2

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  22 in total

Review 1.  Bacterial RNA thermometers: molecular zippers and switches.

Authors:  Jens Kortmann; Franz Narberhaus
Journal:  Nat Rev Microbiol       Date:  2012-03-16       Impact factor: 60.633

2.  Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.

Authors:  Dorith Wunnicke; Denise Strohbach; Julia E Weigand; Bettina Appel; Emiliano Feresin; Beatrix Suess; Sabine Müller; Heinz-Jürgen Steinhoff
Journal:  RNA       Date:  2010-11-19       Impact factor: 4.942

3.  Structure guided fluorescence labeling reveals a two-step binding mechanism of neomycin to its RNA aptamer.

Authors:  Henrik Gustmann; Anna-Lena J Segler; Dnyaneshwar B Gophane; Andreas J Reuss; Christian Grünewald; Markus Braun; Julia E Weigand; Snorri Th Sigurdsson; Josef Wachtveitl
Journal:  Nucleic Acids Res       Date:  2019-01-10       Impact factor: 16.971

Review 4.  Structure and function of preQ1 riboswitches.

Authors:  Catherine D Eichhorn; Mijeong Kang; Juli Feigon
Journal:  Biochim Biophys Acta       Date:  2014-05-04

5.  Rapid fluorescent detection of Escherichia coli K88 based on DNA aptamer library as direct and specific reporter combined with immuno-magnetic separation.

Authors:  Zhihui Peng; Min Ling; Yi Ning; Le Deng
Journal:  J Fluoresc       Date:  2014-04-25       Impact factor: 2.217

6.  Regulation of gene expression in diverse cyanobacterial species by using theophylline-responsive riboswitches.

Authors:  Amy T Ma; Calvin M Schmidt; James W Golden
Journal:  Appl Environ Microbiol       Date:  2014-08-22       Impact factor: 4.792

7.  Intracellular light-activation of riboswitch activity.

Authors:  Steven Walsh; Laura Gardner; Alexander Deiters; Gavin J Williams
Journal:  Chembiochem       Date:  2014-05-26       Impact factor: 3.164

8.  Expression, purification and analysis of the activity of enzymes from the pentose phosphate pathway.

Authors:  Patrick K Arthur; Luigi J Alvarado; T Kwaku Dayie
Journal:  Protein Expr Purif       Date:  2010-11-24       Impact factor: 1.650

9.  Probing adenine rings and backbone linkages using base specific isotope-edited Raman spectroscopy: application to group II intron ribozyme domain V.

Authors:  Yuanyuan Chen; Nadukkudy V Eldho; T Kwaku Dayie; Paul R Carey
Journal:  Biochemistry       Date:  2010-04-27       Impact factor: 3.162

10.  Challenges and opportunities for small molecule aptamer development.

Authors:  Maureen McKeague; Maria C Derosa
Journal:  J Nucleic Acids       Date:  2012-10-24
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