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Literature DB >> 19756015

To sequence or not to sequence the whole-soil metagenome?

Philippe C Baveye.

Abstract

Entities: Species

Mesh：

Substances：
DNA, Bacterial

Year: 2009 PMID： 19756015 DOI： 10.1038/nrmicro2119-c2

Source DB: PubMed Journal: Nat Rev Microbiol ISSN： 1740-1526 Impact factor: 60.633

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8 in total

1. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms.

Authors: M R Rondon; P R August; A D Bettermann; S F Brady; T H Grossman; M R Liles; K A Loiacono; B A Lynch; I A MacNeil; C Minor; C L Tiong; M Gilman; M S Osburne; J Clardy; J Handelsman; R M Goodman
Journal: Appl Environ Microbiol Date: 2000-06 Impact factor: 4.792

2. Effect of microbial activity on trace element release from sewage sludge.

Authors: Shabnam Qureshi; Brian K Richards; Anthony G Hay; Christine C Tsai; Murray B McBride; Philippe Baveye; Tammo S Steenhuis
Journal: Environ Sci Technol Date: 2003-08-01 Impact factor: 9.028

Review 3. Metaproteomics: studying functional gene expression in microbial ecosystems.

Authors: Paul Wilmes; Philip L Bond
Journal: Trends Microbiol Date: 2006-01-09 Impact factor: 17.079

4. High-resolution metagenomics targets specific functional types in complex microbial communities.

Authors: Marina G Kalyuzhnaya; Alla Lapidus; Natalia Ivanova; Alex C Copeland; Alice C McHardy; Ernest Szeto; Asaf Salamov; Igor V Grigoriev; Dominic Suciu; Samuel R Levine; Victor M Markowitz; Isidore Rigoutsos; Susannah G Tringe; David C Bruce; Paul M Richardson; Mary E Lidstrom; Ludmila Chistoserdova
Journal: Nat Biotechnol Date: 2008-09 Impact factor: 54.908

5. Further biogeochemical characterization of a trichloroethene-contaminated fractured dolomite aquifer: electron source and microbial communities involved in reductive dechlorination.

Authors: A M Hohnstock-Ashe; S M Plummer; R M Yager; P Baveye; E L Madsen
Journal: Environ Sci Technol Date: 2001-11-15 Impact factor: 9.028

6. An invitation to the marriage of metagenomics and metabolomics.

Authors: Peter J Turnbaugh; Jeffrey I Gordon
Journal: Cell Date: 2008-09-05 Impact factor: 41.582

Review 7. Molecular eco-systems biology: towards an understanding of community function.

Authors: Jeroen Raes; Peer Bork
Journal: Nat Rev Microbiol Date: 2008-09 Impact factor: 60.633

8. Electron microprobe and synchrotron x-ray fluorescence mapping of the heterogeneous distribution of copper in high-copper vineyard soils.

Authors: Astrid R Jacobson; Sylvie Dousset; Francis Andreux; Philippe C Baveye
Journal: Environ Sci Technol Date: 2007-09-15 Impact factor: 9.028

8 in total

5 in total

1. Metagenomic mining for microbiologists.

Authors: Tom O Delmont; Cedric Malandain; Emmanuel Prestat; Catherine Larose; Jean-Michel Monier; Pascal Simonet; Timothy M Vogel
Journal: ISME J Date: 2011-05-19 Impact factor: 10.302

Review 2. Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Authors: Philippe C Baveye; Wilfred Otten; Alexandra Kravchenko; María Balseiro-Romero; Éléonore Beckers; Maha Chalhoub; Christophe Darnault; Thilo Eickhorst; Patricia Garnier; Simona Hapca; Serkan Kiranyaz; Olivier Monga; Carsten W Mueller; Naoise Nunan; Valérie Pot; Steffen Schlüter; Hannes Schmidt; Hans-Jörg Vogel
Journal: Front Microbiol Date: 2018-08-27 Impact factor: 5.640