Literature DB >> 18775300

An invitation to the marriage of metagenomics and metabolomics.

Peter J Turnbaugh1, Jeffrey I Gordon.   

Abstract

Metagenomics seeks to characterize the composition of microbial communities, their operations, and their dynamically coevolving relationships with the habitats they occupy without having to culture community members. Uniting metagenomics with analyses of the products of microbial community metabolism (metabolomics) will shed light on how microbial communities function in a variety of environments, including the human body.

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Year:  2008        PMID: 18775300     DOI: 10.1016/j.cell.2008.08.025

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  73 in total

1.  Intervention, integration and translation in obesity research: Genetic, developmental and metaorganismal approaches.

Authors:  Maureen A O'Malley; Karola Stotz
Journal:  Philos Ethics Humanit Med       Date:  2011-01-28       Impact factor: 2.464

Review 2.  Diversity and function of the avian gut microbiota.

Authors:  Kevin D Kohl
Journal:  J Comp Physiol B       Date:  2012-01-14       Impact factor: 2.200

3.  Metabolic fate of polyphenols in the human superorganism.

Authors:  John van Duynhoven; Elaine E Vaughan; Doris M Jacobs; Robèr A Kemperman; Ewoud J J van Velzen; Gabriele Gross; Laure C Roger; Sam Possemiers; Age K Smilde; Joël Doré; Johan A Westerhuis; Tom Van de Wiele
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-25       Impact factor: 11.205

Review 4.  Metagenomic analyses: past and future trends.

Authors:  Carola Simon; Rolf Daniel
Journal:  Appl Environ Microbiol       Date:  2010-12-17       Impact factor: 4.792

Review 5.  Dietary conjugated linoleic acid and n-3 polyunsaturated fatty acids in inflammatory bowel disease.

Authors:  Josep Bassaganya-Riera; Raquel Hontecillas
Journal:  Curr Opin Clin Nutr Metab Care       Date:  2010-09       Impact factor: 4.294

6.  Soil microbial community responses to a decade of warming as revealed by comparative metagenomics.

Authors:  Chengwei Luo; Luis M Rodriguez-R; Eric R Johnston; Liyou Wu; Lei Cheng; Kai Xue; Qichao Tu; Ye Deng; Zhili He; Jason Zhou Shi; Mengting Maggie Yuan; Rebecca A Sherry; Dejun Li; Yiqi Luo; Edward A G Schuur; Patrick Chain; James M Tiedje; Jizhong Zhou; Konstantinos T Konstantinidis
Journal:  Appl Environ Microbiol       Date:  2013-12-27       Impact factor: 4.792

7.  Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules.

Authors:  Roie Levy; Elhanan Borenstein
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-15       Impact factor: 11.205

Review 8.  Cell metabolomics.

Authors:  Aihua Zhang; Hui Sun; Hongying Xu; Shi Qiu; Xijun Wang
Journal:  OMICS       Date:  2013-08-29

9.  To sequence or not to sequence the whole-soil metagenome?

Authors:  Philippe C Baveye
Journal:  Nat Rev Microbiol       Date:  2009-10       Impact factor: 60.633

Review 10.  Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.

Authors:  Eric A Franzosa; Tiffany Hsu; Alexandra Sirota-Madi; Afrah Shafquat; Galeb Abu-Ali; Xochitl C Morgan; Curtis Huttenhower
Journal:  Nat Rev Microbiol       Date:  2015-04-27       Impact factor: 60.633

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