Literature DB >> 17948777

Electron microprobe and synchrotron x-ray fluorescence mapping of the heterogeneous distribution of copper in high-copper vineyard soils.

Astrid R Jacobson1, Sylvie Dousset, Francis Andreux, Philippe C Baveye.   

Abstract

The response of microorganisms to metal contamination of soils varies significantly from one investigation to another. One explanation is that metals are heterogeneously distributed at spatial scales relevant to microbes and that microoorganisms are able to avoid zones of intense contamination. This article aims to assess the microscale distribution of Cu in a vineyard soil. The spatial distribution of Cu was measured at two resolutions (0.3 mm and 20 microm) in thin sections of the surface 4 cm of undisturbed soil by electron microprobe and synchrotron X-ray microfluo-rescence spectroscopy. Bulk physicochemical analyses of Cu, pH, organic matter, texture, and mineralogy were performed. The results indicate that the Cu distribution is strongly heterogeneous at both scales of observation. Entire regions of the thin sections are virtually devoid of Cu, whereas highly localized "hotspots" have Cu signal intensities thousands of times higher than background. The distribution of Rb, or Al and Si, indicators of clay minerals, or Fe (iron (hydr)oxides), show that Cu is not preferentially associated with these mineral phases. Instead, Cu hotspots are associated with particulate organic matter. These observations suggest modification of current sampling protocols, and design of ecotoxicological experiments involving microorganisms, for contaminated soils.

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Year:  2007        PMID: 17948777     DOI: 10.1021/es070707m

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  8 in total

1.  To sequence or not to sequence the whole-soil metagenome?

Authors:  Philippe C Baveye
Journal:  Nat Rev Microbiol       Date:  2009-10       Impact factor: 60.633

Review 2.  Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Authors:  Philippe C Baveye; Wilfred Otten; Alexandra Kravchenko; María Balseiro-Romero; Éléonore Beckers; Maha Chalhoub; Christophe Darnault; Thilo Eickhorst; Patricia Garnier; Simona Hapca; Serkan Kiranyaz; Olivier Monga; Carsten W Mueller; Naoise Nunan; Valérie Pot; Steffen Schlüter; Hannes Schmidt; Hans-Jörg Vogel
Journal:  Front Microbiol       Date:  2018-08-27       Impact factor: 5.640

3.  Real Time, Spatial, and Temporal Mapping of the Distribution of c-di-GMP during Biofilm Development.

Authors:  Harikrishnan A S Nair; Saravanan Periasamy; Liang Yang; Staffan Kjelleberg; Scott A Rice
Journal:  J Biol Chem       Date:  2016-11-29       Impact factor: 5.157

4.  Contamination of apple orchard soils and fruit trees with copper-based fungicides: sampling aspects.

Authors:  Quanying Wang; Jingshuang Liu; Qiang Liu
Journal:  Environ Monit Assess       Date:  2014-11-19       Impact factor: 2.513

5.  Landscape-Scale Factors Affecting the Prevalence of Escherichia coli in Surface Soil Include Land Cover Type, Edge Interactions, and Soil pH.

Authors:  Nicholas Dusek; Austin J Hewitt; Kaycie N Schmidt; Peter W Bergholz
Journal:  Appl Environ Microbiol       Date:  2018-05-01       Impact factor: 4.792

6.  Insights into the mercury(II) adsorption and binding mechanism onto several typical soils in China.

Authors:  Xiuhong Ding; Renqing Wang; Yuncong Li; Yandong Gan; Shuwei Liu; Jiulan Dai
Journal:  Environ Sci Pollut Res Int       Date:  2017-08-30       Impact factor: 4.223

7.  Absorption mechanisms of Cu(2+) on a biogenic bixbyite-like Mn2O3 produced by Bacillus CUA isolated from soil.

Authors:  Zhijun Zhang; Jing Lai; Hui Yin; Xionghan Feng; Wenfeng Tan; Fan Liu
Journal:  Geochem Trans       Date:  2015-05-13       Impact factor: 4.737

8.  Three-Dimensional Mapping of Soil Chemical Characteristics at Micrometric Scale by Combining 2D SEM-EDX Data and 3D X-Ray CT Images.

Authors:  Simona Hapca; Philippe C Baveye; Clare Wilson; Richard Murray Lark; Wilfred Otten
Journal:  PLoS One       Date:  2015-09-15       Impact factor: 3.240

  8 in total

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