Literature DB >> 19750752

How to make a DNA chip.

Michael C Pirrung1.   

Abstract

Microarrays are one of the hottest areas in biological research today. Microarrays have been mostly applied to nucleic acid analysis, specifically to the assessment of which genes are being expressed and at what level. Early microarrays were prepared by using photolithographic methods, which were more commonly used for integrated circuit ("computer chip") production. Hence the colloquial term "DNA chip" came into being. The completion of the sequencing of the human genome and that of many other organisms makes the determination of gene function an important next step in understanding the role of DNA in the processes of life. DNA microarrays are an excellent tool to address this question because their numerous probe sites enable the analysis of many genes simultaneously. With good experience in this initial use, many further applications of microarrays are being developed, including genotyping in research and genetic diagnosis in medicine. DNA microarrays have made abundantly clear the power of vast parallelism in biological analysis, which is raising interest in other types of microarrays (small-molecule, protein). Many applications for DNA microarrays have been developed and clearly many more will emerge through the creativity of the scientists who use them. In early studies, users produced their own microarrays. The apparent power of microarrays has demanded improvements in production methods, and technologies from physical sciences and engineering are now being applied to DNA chips. Many branches of chemistry can contribute to improved methods: from synthetic chemistry (to attach or prepare DNA), to the physical chemistry of surfaces, to analytical chemistry (to assess surface reactions).

Entities:  

Mesh:

Year:  2002        PMID: 19750752     DOI: 10.1002/1521-3773(20020415)41:8<1276::aid-anie1276>3.0.co;2-2

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  39 in total

1.  Sensitivity, specificity, and the hybridization isotherms of DNA chips.

Authors:  A Halperin; A Buhot; E B Zhulina
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

2.  Combination of DNA-directed immobilization and immuno-PCR: very sensitive antigen detection by means of self-assembled DNA-protein conjugates.

Authors:  Christof M Niemeyer; Ron Wacker; Michael Adler
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

3.  Mismatching base-pair dependence of the kinetics of DNA-DNA hybridization studied by surface plasmon fluorescence spectroscopy.

Authors:  Keiko Tawa; Wolfgang Knoll
Journal:  Nucleic Acids Res       Date:  2004-04-28       Impact factor: 16.971

4.  Rapid Capture and Release of Nucleic Acids through a Reversible Photo-Cycloaddition Reaction in a Psoralen-Functionalized Hydrogel.

Authors:  Yizhe Zhang; Peggy P Y Chan; Amy E Herr
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-24       Impact factor: 15.336

5.  Brush effects on DNA chips: thermodynamics, kinetics, and design guidelines.

Authors:  A Halperin; A Buhot; E B Zhulina
Journal:  Biophys J       Date:  2005-05-20       Impact factor: 4.033

6.  How to improve quality assurance in fluorometry: fluorescence-inherent sources of error and suited fluorescence standards.

Authors:  U Resch-Genger; K Hoffmann; W Nietfeld; A Engel; J Neukammer; R Nitschke; B Ebert; R Macdonald
Journal:  J Fluoresc       Date:  2005-05       Impact factor: 2.217

7.  Fluorescence spectroscopic studies on plasma-chemically modified polymer surfaces with fluorophore-labeled functionalities.

Authors:  K Hoffmann; U Resch-Genger; R Mix; J F Friedrich
Journal:  J Fluoresc       Date:  2006-05-16       Impact factor: 2.217

8.  DNA-encoded antibody libraries: a unified platform for multiplexed cell sorting and detection of genes and proteins.

Authors:  Ryan C Bailey; Gabriel A Kwong; Caius G Radu; Owen N Witte; James R Heath
Journal:  J Am Chem Soc       Date:  2007-01-30       Impact factor: 15.419

9.  Comparison of hydroxylated print additives on antibody microarray performance.

Authors:  Peng Wu; David W Grainger
Journal:  J Proteome Res       Date:  2006-11       Impact factor: 4.466

10.  Fluorescence, XPS, and TOF-SIMS surface chemical state image analysis of DNA microarrays.

Authors:  Chi-Ying Lee; Gregory M Harbers; David W Grainger; Lara J Gamble; David G Castner
Journal:  J Am Chem Soc       Date:  2007-07-11       Impact factor: 15.419

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