Literature DB >> 19744855

Cell regulation: determined to signal discrete cooperation.

Toby J Gibson1.   

Abstract

Do kinases cascade? How well is cell regulation understood? What are the best ways to model regulatory systems? Attempts to answer such questions can have bearings on the way in which research is conducted. Fortunately there are recurring themes in regulatory processes from many different cellular contexts, which might provide useful guidance. Three principles seem to be almost universal: regulatory interactions are cooperative; regulatory decisions are made by large dynamic protein complexes; and regulation is intricately networked. A fourth principle, although not universal, is remarkably common: regulatory proteins are actively placed where they are needed. Here, I argue that the true nature of cell signalling and our perceptions of it are in a state of discord. This raises the question: Are our misconceptions detrimental to progress in biomedical science?

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Year:  2009        PMID: 19744855     DOI: 10.1016/j.tibs.2009.06.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  77 in total

1.  Composite low affinity interactions dictate recognition of the cyclin-dependent kinase inhibitor Sic1 by the SCFCdc4 ubiquitin ligase.

Authors:  Xiaojing Tang; Stephen Orlicky; Tanja Mittag; Veronika Csizmok; Tony Pawson; Julie D Forman-Kay; Frank Sicheri; Mike Tyers
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-10       Impact factor: 11.205

Review 2.  The discovery of modular binding domains: building blocks of cell signalling.

Authors:  Bruce J Mayer
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-30       Impact factor: 94.444

3.  Engineering of weak helper interactions for high-efficiency FRET probes.

Authors:  Raik Grünberg; Julia V Burnier; Tony Ferrar; Violeta Beltran-Sastre; François Stricher; Almer M van der Sloot; Raquel Garcia-Olivas; Arrate Mallabiabarrena; Xavier Sanjuan; Timo Zimmermann; Luis Serrano
Journal:  Nat Methods       Date:  2013-09-01       Impact factor: 28.547

4.  The transience of transient overexpression.

Authors:  Toby J Gibson; Markus Seiler; Reiner A Veitia
Journal:  Nat Methods       Date:  2013-08       Impact factor: 28.547

5.  The (un)targeted cancer kinome.

Authors:  Oleg Fedorov; Susanne Müller; Stefan Knapp
Journal:  Nat Chem Biol       Date:  2010-03       Impact factor: 15.040

6.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

Review 7.  Strategies for protein synthetic biology.

Authors:  Raik Grünberg; Luis Serrano
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

8.  Building blocks for protein interaction devices.

Authors:  Raik Grünberg; Tony S Ferrar; Almer M van der Sloot; Marco Constante; Luis Serrano
Journal:  Nucleic Acids Res       Date:  2010-03-09       Impact factor: 16.971

9.  Evidence for the concerted evolution between short linear protein motifs and their flanking regions.

Authors:  Claudia Chica; Francesca Diella; Toby J Gibson
Journal:  PLoS One       Date:  2009-07-08       Impact factor: 3.240

10.  A structure filter for the Eukaryotic Linear Motif Resource.

Authors:  Allegra Via; Cathryn M Gould; Christine Gemünd; Toby J Gibson; Manuela Helmer-Citterich
Journal:  BMC Bioinformatics       Date:  2009-10-24       Impact factor: 3.169

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