Literature DB >> 19719273

Temperature and chemical denaturant dependence of forced unfolding of titin I27.

Eric Botello1, Nolan C Harris, Jacob Sargent, Wei-Hung Chen, Kuan-Jiuh Lin, Ching-Hwa Kiang.   

Abstract

Single-molecule force measurement opens a new door for investigating detailed biomolecular interactions and their thermodynamic properties by pulling molecules apart while monitoring the force exerted on them. Recent advances in the nonequilibrium work theorem allows one to determine the free-energy landscapes of these events. Such information is valuable for understanding processes such as protein and RNA folding and receptor-ligand binding. Here, we used force as a physical parameter under the traditional chemical and temperature denaturing environment to alter the protein folding energy landscape and compared the change in the unfolding free-energy barrier of the I27 domain of human cardiac titin. We found that the trends in protein unfolding free-energy barriers are consistent for single-molecule force measurements and bulk chemical and temperature studies. The results suggest that the information from single-molecule pulling experiments are meaningful and useful for understanding the mechanism of folding of titin I27.

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Year:  2009        PMID: 19719273      PMCID: PMC2739119          DOI: 10.1021/jp9002356

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  37 in total

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5.  DNA unzipped under a constant force exhibits multiple metastable intermediates.

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7.  Quantum mechanics/molecular mechanics minimum free-energy path for accurate reaction energetics in solution and enzymes: sequential sampling and optimization on the potential of mean force surface.

Authors:  Hao Hu; Zhenyu Lu; Jerry M Parks; Steven K Burger; Weitao Yang
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8.  Role of the familial Dutch mutation E22Q in the folding and aggregation of the 15-28 fragment of the Alzheimer amyloid-beta protein.

Authors:  Andrij Baumketner; Mary Griffin Krone; Joan-Emma Shea
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-11       Impact factor: 11.205

9.  How does a protein fold?

Authors:  A Sali; E Shakhnovich; M Karplus
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  6 in total

1.  Computational investigation of the effect of thermal perturbation on the mechanical unfolding of titin I27.

Authors:  Navneet Bung; U Deva Priyakumar
Journal:  J Mol Model       Date:  2011-11-27       Impact factor: 1.810

2.  Direct quantification of the attempt frequency determining the mechanical unfolding of ubiquitin protein.

Authors:  Ionel Popa; Julio M Fernández; Sergi Garcia-Manyes
Journal:  J Biol Chem       Date:  2011-07-16       Impact factor: 5.157

3.  Titin-Based Nanoparticle Tension Sensors Map High-Magnitude Integrin Forces within Focal Adhesions.

Authors:  Kornelia Galior; Yang Liu; Kevin Yehl; Skanda Vivek; Khalid Salaita
Journal:  Nano Lett       Date:  2015-12-07       Impact factor: 11.189

4.  Folding pathway of an Ig domain is conserved on and off the ribosome.

Authors:  Pengfei Tian; Annette Steward; Renuka Kudva; Ting Su; Patrick J Shilling; Adrian A Nickson; Jeffrey J Hollins; Roland Beckmann; Gunnar von Heijne; Jane Clarke; Robert B Best
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-09       Impact factor: 11.205

5.  Protein Unfolding: Denaturant vs. Force.

Authors:  Colleen Kelly; Matthew J Gage
Journal:  Biomedicines       Date:  2021-10-05

6.  Multiscale mechanobiology: mechanics at the molecular, cellular, and tissue levels.

Authors:  Chin-Lin Guo; Nolan C Harris; Sithara S Wijeratne; Eric W Frey; Ching-Hwa Kiang
Journal:  Cell Biosci       Date:  2013-06-03       Impact factor: 7.133

  6 in total

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