Literature DB >> 18408165

Role of the familial Dutch mutation E22Q in the folding and aggregation of the 15-28 fragment of the Alzheimer amyloid-beta protein.

Andrij Baumketner1, Mary Griffin Krone, Joan-Emma Shea.   

Abstract

Amyloid fibrils, large ordered aggregates of amyloid beta proteins (Abeta), are clinical hallmarks of Alzheimer's disease (AD). The aggregation properties of amyloid beta proteins can be strongly affected by single-point mutations at positions 22 and 23. The Dutch mutation involves a substitution at position 22 (E22Q) and leads to increased deposition rates of the AbetaE22Q peptide onto preseeded fibrils. We investigate the effect of the E22Q mutation on two key regions involved in the folding and aggregation of the Abeta peptide through replica exchange molecular dynamics simulations of the 15-28 fragment of the Abeta peptide. The Abeta15-28 peptide encompasses the 22-28 region that constitutes the most structured part of the Abeta peptide (the E22-K28 bend), as well as the central hydrophobic cluster (CHC) (segment 17-21), the primary docking site for Abeta monomers depositing onto fibrils. Our simulations show that the 22-28 bend is preserved in the Abeta(15-28) peptide and that the CHC, which is mostly unstructured, interacts with this bend region. The E22Q mutation does not affect the structure of the bend but weakens the interactions between the CHC and the bend. This leads to an increased population of beta-structure in the CHC. Our analysis of the fibril elongation reaction reveals that the CHC adopts a beta-strand conformation in the transition state ensemble, and that the E22Q mutation increases aggregation rates by lowering the barrier for Abeta monomer deposition onto a fibril. Thermodynamic signatures of this enhanced fibrillization process from our simulations are in good agreement with experimental observations.

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Year:  2008        PMID: 18408165      PMCID: PMC2329720          DOI: 10.1073/pnas.0708193105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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Authors:  W P Esler; E R Stimson; J M Jennings; H V Vinters; J R Ghilardi; J P Lee; P W Mantyh; J E Maggio
Journal:  Biochemistry       Date:  2000-05-30       Impact factor: 3.162

2.  Substitutions at codon 22 of Alzheimer's abeta peptide induce diverse conformational changes and apoptotic effects in human cerebral endothelial cells.

Authors:  L Miravalle; T Tokuda; R Chiarle; G Giaccone; O Bugiani; F Tagliavini; B Frangione; J Ghiso
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Review 3.  Amyloid fibrillogenesis: themes and variations.

Authors:  J C Rochet; P T Lansbury
Journal:  Curr Opin Struct Biol       Date:  2000-02       Impact factor: 6.809

4.  Point substitution in the central hydrophobic cluster of a human beta-amyloid congener disrupts peptide folding and abolishes plaque competence.

Authors:  W P Esler; E R Stimson; J R Ghilardi; Y A Lu; A M Felix; H V Vinters; P W Mantyh; J P Lee; J E Maggio
Journal:  Biochemistry       Date:  1996-11-05       Impact factor: 3.162

5.  Charge alterations of E22 enhance the pathogenic properties of the amyloid beta-protein.

Authors:  J P Melchor; L McVoy; W E Van Nostrand
Journal:  J Neurochem       Date:  2000-05       Impact factor: 5.372

6.  Activation barriers to structural transition determine deposition rates of Alzheimer's disease a beta amyloid.

Authors:  W P Esler; A M Felix; E R Stimson; M J Lachenmann; J R Ghilardi; Y A Lu; H V Vinters; P W Mantyh; J P Lee; J E Maggio
Journal:  J Struct Biol       Date:  2000-06       Impact factor: 2.867

7.  The Alzheimer's peptide a beta adopts a collapsed coil structure in water.

Authors:  S Zhang; K Iwata; M J Lachenmann; J W Peng; S Li; E R Stimson; Y Lu; A M Felix; J E Maggio; J P Lee
Journal:  J Struct Biol       Date:  2000-06       Impact factor: 2.867

8.  In vitro growth of Alzheimer's disease beta-amyloid plaques displays first-order kinetics.

Authors:  W P Esler; E R Stimson; J R Ghilardi; H V Vinters; J P Lee; P W Mantyh; J E Maggio
Journal:  Biochemistry       Date:  1996-01-23       Impact factor: 3.162

9.  Fibril formation by primate, rodent, and Dutch-hemorrhagic analogues of Alzheimer amyloid beta-protein.

Authors:  P E Fraser; J T Nguyen; H Inouye; W K Surewicz; D J Selkoe; M B Podlisny; D A Kirschner
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10.  Amyloid beta protein precursor gene and hereditary cerebral hemorrhage with amyloidosis (Dutch).

Authors:  C Van Broeckhoven; J Haan; E Bakker; J A Hardy; W Van Hul; A Wehnert; M Vegter-Van der Vlis; R A Roos
Journal:  Science       Date:  1990-06-01       Impact factor: 47.728

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  29 in total

1.  β-Amyloid carrying the Dutch mutation has diverse effects on calpain-mediated toxicity in hippocampal neurons.

Authors:  Alexandra M Nicholson; Lindsey A Wold; Dominic M Walsh; Adriana Ferreira
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2.  Investigating how peptide length and a pathogenic mutation modify the structural ensemble of amyloid beta monomer.

Authors:  Yu-Shan Lin; Gregory R Bowman; Kyle A Beauchamp; Vijay S Pande
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3.  Association thermodynamics and conformational stability of beta-sheet amyloid beta(17-42) oligomers: effects of E22Q (Dutch) mutation and charge neutralization.

Authors:  Nikolay Blinov; Lyudmyla Dorosh; David Wishart; Andriy Kovalenko
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4.  Design and Optimization of Anti-amyloid Domain Antibodies Specific for β-Amyloid and Islet Amyloid Polypeptide.

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5.  Side-chain hydrophobicity and the stability of Aβ₁₆₋₂₂ aggregates.

Authors:  Workalemahu M Berhanu; Ulrich H E Hansmann
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6.  Effects of familial Alzheimer's disease mutations on the folding nucleation of the amyloid beta-protein.

Authors:  Mary Griffin Krone; Andrij Baumketner; Summer L Bernstein; Thomas Wyttenbach; Noel D Lazo; David B Teplow; Michael T Bowers; Joan-Emma Shea
Journal:  J Mol Biol       Date:  2008-06-04       Impact factor: 5.469

7.  Comparative fibril formation of analogs corresponding to the (12-24) segment of the β-amyloid peptide.

Authors:  Luciana Malavolta; Clóvis R Nakaie
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Review 8.  Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies.

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Journal:  Chem Rev       Date:  2015-03-19       Impact factor: 60.622

9.  Role of β-hairpin formation in aggregation: the self-assembly of the amyloid-β(25-35) peptide.

Authors:  Luca Larini; Joan-Emma Shea
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

10.  A condensation-ordering mechanism in nanoparticle-catalyzed peptide aggregation.

Authors:  Stefan Auer; Antonio Trovato; Michele Vendruscolo
Journal:  PLoS Comput Biol       Date:  2009-08-14       Impact factor: 4.475

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