Literature DB >> 19718016

The 'rare biosphere': a reality check.

Jens Reeder1, Rob Knight.   

Abstract

Mesh：

Substances：

Year:  2009        PMID： 19718016     DOI： 10.1038/nmeth0909-636

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


× No keyword cloud information.
  10 in total

1.  Microbial diversity in the deep sea and the underexplored "rare biosphere".

Authors:  Mitchell L Sogin; Hilary G Morrison; Julie A Huber; David Mark Welch; Susan M Huse; Phillip R Neal; Jesus M Arrieta; Gerhard J Herndl
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-31       Impact factor: 11.205

2.  Pyrosequencing enumerates and contrasts soil microbial diversity.

Authors:  Luiz F W Roesch; Roberta R Fulthorpe; Alberto Riva; George Casella; Alison K M Hadwin; Angela D Kent; Samira H Daroub; Flavio A O Camargo; William G Farmerie; Eric W Triplett
Journal:  ISME J       Date:  2007-07-05       Impact factor: 10.302

3.  Accurate phylogenetic classification of variable-length DNA fragments.

Authors:  Alice Carolyn McHardy; Héctor García Martín; Aristotelis Tsirigos; Philip Hugenholtz; Isidore Rigoutsos
Journal:  Nat Methods       Date:  2006-12-10       Impact factor: 28.547

Review 4.  A renaissance for the pioneering 16S rRNA gene.

Authors:  Susannah G Tringe; Philip Hugenholtz
Journal:  Curr Opin Microbiol       Date:  2008-10-08       Impact factor: 7.934

5.  Accurate determination of microbial diversity from 454 pyrosequencing data.

Authors:  Christopher Quince; Anders Lanzén; Thomas P Curtis; Russell J Davenport; Neil Hall; Ian M Head; L Fiona Read; William T Sloan
Journal:  Nat Methods       Date:  2009-08-09       Impact factor: 28.547

6.  The influence of sex, handedness, and washing on the diversity of hand surface bacteria.

Authors:  Noah Fierer; Micah Hamady; Christian L Lauber; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-12       Impact factor: 11.205

7.  Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models.

Authors:  Arthur Brady; Steven L Salzberg
Journal:  Nat Methods       Date:  2009-08-02       Impact factor: 28.547

8.  Evolution of mammals and their gut microbes.

Authors:  Ruth E Ley; Micah Hamady; Catherine Lozupone; Peter J Turnbaugh; Rob Roy Ramey; J Stephen Bircher; Michael L Schlegel; Tammy A Tucker; Mark D Schrenzel; Rob Knight; Jeffrey I Gordon
Journal:  Science       Date:  2008-05-22       Impact factor: 47.728

9.  A core gut microbiome in obese and lean twins.

Authors:  Peter J Turnbaugh; Micah Hamady; Tanya Yatsunenko; Brandi L Cantarel; Alexis Duncan; Ruth E Ley; Mitchell L Sogin; William J Jones; Bruce A Roe; Jason P Affourtit; Michael Egholm; Bernard Henrissat; Andrew C Heath; Rob Knight; Jeffrey I Gordon
Journal:  Nature       Date:  2008-11-30       Impact factor: 49.962

10.  Accuracy and quality of massively parallel DNA pyrosequencing.

Authors:  Susan M Huse; Julie A Huber; Hilary G Morrison; Mitchell L Sogin; David Mark Welch
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583
  10 in total
  90 in total

1.  Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships.

Authors:  Jürg Brendan Logue; Silke Langenheder; Anders F Andersson; Stefan Bertilsson; Stina Drakare; Anders Lanzén; Eva S Lindström
Journal:  ISME J       Date:  2011-12-15       Impact factor: 10.302

2.  Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air.

Authors:  Naomichi Yamamoto; Kyle Bibby; Jing Qian; Denina Hospodsky; Hamid Rismani-Yazdi; William W Nazaroff; Jordan Peccia
Journal:  ISME J       Date:  2012-04-05       Impact factor: 10.302

3.  In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes.

Authors:  Laura C Bohorquez; Luisa Delgado-Serrano; Gina López; César Osorio-Forero; Vanja Klepac-Ceraj; Roberto Kolter; Howard Junca; Sandra Baena; María Mercedes Zambrano
Journal:  Microb Ecol       Date:  2011-09-27       Impact factor: 4.552

4.  Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges.

Authors:  Susanne Schmitt; Peter Tsai; James Bell; Jane Fromont; Micha Ilan; Niels Lindquist; Thierry Perez; Allen Rodrigo; Peter J Schupp; Jean Vacelet; Nicole Webster; Ute Hentschel; Michael W Taylor
Journal:  ISME J       Date:  2011-10-13       Impact factor: 10.302

5.  Patterns and processes in microbial biogeography: do molecules and morphologies give the same answers?

Authors:  Luciana F Santoferrara; Jean-David Grattepanche; Laura A Katz; George B McManus
Journal:  ISME J       Date:  2016-02-05       Impact factor: 10.302

6.  Siderophores from neighboring organisms promote the growth of uncultured bacteria.

Authors:  Anthony D'Onofrio; Jason M Crawford; Eric J Stewart; Kathrin Witt; Ekaterina Gavrish; Slava Epstein; Jon Clardy; Kim Lewis
Journal:  Chem Biol       Date:  2010-03-26

7.  Diversity of cyanobacterial species and phylotypes in biofilms from the littoral zone of Lake Baikal.

Authors:  Ekaterina G Sorokovikova; Olga I Belykh; Anna S Gladkikh; Oleg V Kotsar; Irina V Tikhonova; Oleg A Timoshkin; Valentina V Parfenova
Journal:  J Microbiol       Date:  2013-12-19       Impact factor: 3.422

8.  Winter-summer succession of unicellular eukaryotes in a meso-eutrophic coastal system.

Authors:  Urania Christaki; Konstantinos A Kormas; Savvas Genitsaris; Clément Georges; Télesphore Sime-Ngando; Eric Viscogliosi; Sébastien Monchy
Journal:  Microb Ecol       Date:  2013-10-01       Impact factor: 4.552

9.  Ecology of the rare microbial biosphere of the Arctic Ocean.

Authors:  Pierre E Galand; Emilio O Casamayor; David L Kirchman; Connie Lovejoy
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-17       Impact factor: 11.205

10.  Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type.

Authors:  Ciara A Carberry; Sinéad M Waters; Sinead M Waters; David A Kenny; Christopher J Creevey
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.