Literature DB >> 19711975

Probing hydrogen bonding environments: solvatochromic effects on the CN vibration of benzonitrile.

Daniel J Aschaffenburg1, Richard S Moog.   

Abstract

The energy of the nitrile stretching mode in benzonitrile is known to be solvent-dependent. Kamlet-Taft solvatochromic parameters pi* and alpha are used to model this dependence in both protic and aprotic solvents using multivariable linear regressions. Aprotic solvents induce red shifts that are shown to be proportional to pi*. In protic solvents, the positions of the two bands attributed to distinct solvation states, F and H, are both fit to the Kamlet-Taft solvatochromic equation. The inclusion of an alpha term yields excellent correlations with the H band, indicative of the strong influence of hydrogen bonding interactions occurring at the nitrile nitrogen in this solvation state. The F band also is best fit by inclusion of the alpha term, albeit with a weaker overall dependence and a much poorer fit than that for the H band. DFT calculations on simple single-molecule complexes with benzonitrile are consistent with the presence of pi-H bonds to the nitrile group as a possible source of the F band dependence on alpha.

Entities:  

Year:  2009        PMID: 19711975     DOI: 10.1021/jp905802a

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  22 in total

1.  Selective incorporation of nitrile-based infrared probes into proteins via cysteine alkylation.

Authors:  Hyunil Jo; Robert M Culik; Ivan V Korendovych; William F Degrado; Feng Gai
Journal:  Biochemistry       Date:  2010-11-17       Impact factor: 3.162

2.  Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules.

Authors:  Matthias M Waegele; Robert M Culik; Feng Gai
Journal:  J Phys Chem Lett       Date:  2011-09-23       Impact factor: 6.475

3.  Solvent-induced infrared frequency shifts in aromatic nitriles are quantitatively described by the vibrational Stark effect.

Authors:  Nicholas M Levinson; Stephen D Fried; Steven G Boxer
Journal:  J Phys Chem B       Date:  2012-04-05       Impact factor: 2.991

4.  Measuring electrostatic fields in both hydrogen-bonding and non-hydrogen-bonding environments using carbonyl vibrational probes.

Authors:  Stephen D Fried; Sayan Bagchi; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2013-07-18       Impact factor: 15.419

5.  Computational Modeling of the Nitrile Stretching Vibration of 5-Cyanoindole in Water.

Authors:  Matthias M Waegele; Feng Gai
Journal:  J Phys Chem Lett       Date:  2010-02-01       Impact factor: 6.475

6.  Solute's perspective on how trimethylamine oxide, urea, and guanidine hydrochloride affect water's hydrogen bonding ability.

Authors:  Ileana M Pazos; Feng Gai
Journal:  J Phys Chem B       Date:  2012-10-09       Impact factor: 2.991

7.  Distinguishing Potassium Channel Resting State Conformations in Live Cells with Environment-Sensitive Fluorescence.

Authors:  Sebastian Fletcher-Taylor; Parashar Thapa; Rebecka J Sepela; Rayan Kaakati; Vladimir Yarov-Yarovoy; Jon T Sack; Bruce E Cohen
Journal:  ACS Chem Neurosci       Date:  2020-07-09       Impact factor: 4.418

8.  Electrostatic fields near the active site of human aldose reductase: 2. New inhibitors and complications caused by hydrogen bonds.

Authors:  Lin Xu; Aina E Cohen; Steven G Boxer
Journal:  Biochemistry       Date:  2011-09-06       Impact factor: 3.162

9.  Conformational Heterogeneity and the Affinity of Substrate Molecular Recognition by Cytochrome P450cam.

Authors:  Edward J Basom; Bryce A Manifold; Megan C Thielges
Journal:  Biochemistry       Date:  2017-06-14       Impact factor: 3.162

10.  Vibrational Stark Effects of Carbonyl Probes Applied to Reinterpret IR and Raman Data for Enzyme Inhibitors in Terms of Electric Fields at the Active Site.

Authors:  Samuel H Schneider; Steven G Boxer
Journal:  J Phys Chem B       Date:  2016-08-31       Impact factor: 2.991

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