Literature DB >> 19705192

Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil.

Bruce C Thomson1, Nick Ostle, Niall McNamara, Mark J Bailey, Andrew S Whiteley, Robert I Griffiths.   

Abstract

Plant-derived organic matter inputs are thought to be a key driver of soil bacterial community composition and associated soil processes. We sought to investigate the role of acid grassland vegetation on soil bacterial community structure by assessing bacterial diversity in combination with other soil variables in temporally and spatially distinct samples taken from a field-based plant removal experiment. Removal of aboveground vegetation resulted in reproducible differences in soil properties, soil respiration and bacterial diversity. Vegetated soils had significantly increased carbon and nitrogen concentrations and exhibited higher rates of respiration. Molecular analyses revealed that the soils were broadly dominated by Alphaproteobacterial and Acidobacterial lineages, with increased abundances of Alphaproteobacteria in vegetated soils and more Acidobacteria in bare soils. This field-based study contributes to a growing body of evidence documenting the effect of soil nutrient status on the relative abundances of dominant soil bacterial taxa, with Proteobacterial taxa dominating over Acidobacteria in soils exhibiting higher rates of C turnover. Furthermore, we highlight the role of aboveground vegetation in mediating this effect by demonstrating that plant removal can alter the relative abundances of dominant soil taxa with concomitant changes in soil CO(2)-C efflux.

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Year:  2009        PMID: 19705192     DOI: 10.1007/s00248-009-9575-z

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  20 in total

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Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

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3.  ARB: a software environment for sequence data.

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Journal:  Nucleic Acids Res       Date:  2004-02-25       Impact factor: 16.971

4.  Nodulation of acacia species by fast- and slow-growing tropical strains of Rhizobium.

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Review 5.  Captured diversity in a culture collection: case study of the geographic and habitat distributions of environmental isolates held at the american type culture collection.

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6.  Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.

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7.  Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil.

Authors:  Michelle Sait; Kathryn E R Davis; Peter H Janssen
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8.  Influence of depth and sampling time on bacterial community structure in an upland grassland soil.

Authors:  Robert I Griffiths; Andrew S Whiteley; Anthony G O'Donnell; Mark J Bailey
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10.  Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed.

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Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

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  26 in total

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4.  Restoration with pioneer plants changes soil properties and remodels the diversity and structure of bacterial communities in rhizosphere and bulk soil of copper mine tailings in Jiangxi Province, China.

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5.  Ericoid Roots and Mycospheres Govern Plant-Specific Bacterial Communities in Boreal Forest Humus.

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Journal:  Microb Ecol       Date:  2016-12-26       Impact factor: 4.552

6.  Diversity of bacterial communities in a profile of a winter wheat field: known and unknown members.

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7.  A robust PCR primer design platform applied to the detection of Acidobacteria Group 1 in soil.

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8.  Distinct Assembly Processes and Determinants of Soil Microbial Communities between Farmland and Grassland in Arid and Semiarid Areas.

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9.  The impact of resource availability on bacterial resistance to phages in soil.

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10.  Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure.

Authors:  Pierre Plassart; Sébastien Terrat; Bruce Thomson; Robert Griffiths; Samuel Dequiedt; Mélanie Lelievre; Tiffanie Regnier; Virginie Nowak; Mark Bailey; Philippe Lemanceau; Antonio Bispo; Abad Chabbi; Pierre-Alain Maron; Christophe Mougel; Lionel Ranjard
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

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