Literature DB >> 19703395

Transposition into replicating DNA occurs through interaction with the processivity factor.

Adam R Parks1, Zaoping Li, Qiaojuan Shi, Roisin M Owens, Moonsoo M Jin, Joseph E Peters.   

Abstract

The bacterial transposon Tn7 directs transposition into actively replicating DNA by a mechanism involving the transposon-encoded protein TnsE. Here we show that TnsE physically and functionally interacts with the processivity factor of the DNA replication machinery in vivo and in vitro. Our work establishes an in vitro TnsABC+E transposition reaction reconstituted from purified proteins and target DNA structures. Using the in vitro reaction we confirm that the processivity factor specifically reorders TnsE-mediated transposition events on target DNAs in a way that matches the bias with active DNA replication in vivo. The TnsE interaction with an essential and conserved component of the replication machinery, and a DNA structure reveals a mechanism by which Tn7, and probably other elements, selects target sites associated with DNA replication.

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Year:  2009        PMID: 19703395      PMCID: PMC2752310          DOI: 10.1016/j.cell.2009.06.011

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  54 in total

1.  Target DNA structure plays a critical role in Tn7 transposition.

Authors:  P N Kuduvalli; J E Rao; N L Craig
Journal:  EMBO J       Date:  2001-02-15       Impact factor: 11.598

2.  Tn7 recognizes transposition target structures associated with DNA replication using the DNA-binding protein TnsE.

Authors:  J E Peters; N L Craig
Journal:  Genes Dev       Date:  2001-03-15       Impact factor: 11.361

3.  Structure of a sliding clamp on DNA.

Authors:  Roxana E Georgescu; Seung-Sup Kim; Olga Yurieva; John Kuriyan; Xiang-Peng Kong; Mike O'Donnell
Journal:  Cell       Date:  2008-01-11       Impact factor: 41.582

4.  Far Western: probing membranes.

Authors:  Margret B Einarson; Elena N Pugacheva; Jason R Orlinick
Journal:  CSH Protoc       Date:  2007-08-01

5.  DnaX complex of Escherichia coli DNA polymerase III holoenzyme. Physical characterization of the DnaX subunits and complexes.

Authors:  H G Dallmann; C S McHenry
Journal:  J Biol Chem       Date:  1995-12-08       Impact factor: 5.157

Review 6.  Instability of inhibited replication forks in E. coli.

Authors:  A Kuzminov
Journal:  Bioessays       Date:  1995-08       Impact factor: 4.345

7.  A universal protein-protein interaction motif in the eubacterial DNA replication and repair systems.

Authors:  B P Dalrymple; K Kongsuwan; G Wijffels; N E Dixon; P A Jennings
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

8.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

Review 9.  Tn7 elements: engendering diversity from chromosomes to episomes.

Authors:  Adam R Parks; Joseph E Peters
Journal:  Plasmid       Date:  2008-11-01       Impact factor: 3.466

10.  Escherichia coli expression vectors containing a protein kinase recognition motif, His6-tag and hemagglutinin epitope.

Authors:  Z Kelman; N Yao; M O'Donnell
Journal:  Gene       Date:  1995-12-01       Impact factor: 3.688

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  29 in total

1.  Tn917 targets the region where DNA replication terminates in Bacillus subtilis, highlighting a difference in chromosome processing in the firmicutes.

Authors:  Qiaojuan Shi; Jose C Huguet-Tapia; Joseph E Peters
Journal:  J Bacteriol       Date:  2009-10-09       Impact factor: 3.490

2.  Unlocking Tn3-family transposase activity in vitro unveils an asymetric pathway for transposome assembly.

Authors:  Emilien Nicolas; Cédric A Oger; Nathan Nguyen; Michaël Lambin; Amandine Draime; Sébastien C Leterme; Michael Chandler; Bernard F J Hallet
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

3.  The Tn7 transposition regulator TnsC interacts with the transposase subunit TnsB and target selector TnsD.

Authors:  Ki Young Choi; Jeanelle M Spencer; Nancy L Craig
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-30       Impact factor: 11.205

4.  Genomic landscape of human, bat, and ex vivo DNA transposon integrations.

Authors:  Rebeca Campos-Sánchez; Aurélie Kapusta; Cédric Feschotte; Francesca Chiaromonte; Kateryna D Makova
Journal:  Mol Biol Evol       Date:  2014-04-22       Impact factor: 16.240

Review 5.  Physiology of the read-write genome.

Authors:  James A Shapiro
Journal:  J Physiol       Date:  2014-06-01       Impact factor: 5.182

Review 6.  Foldback intercoil DNA and the mechanism of DNA transposition.

Authors:  Byung-Dong Kim
Journal:  Genomics Inform       Date:  2014-09-30

7.  A group II intron-encoded protein interacts with the cellular replicative machinery through the β-sliding clamp.

Authors:  Fernando M García-Rodríguez; José L Neira; Marco Marcia; María D Molina-Sánchez; Nicolás Toro
Journal:  Nucleic Acids Res       Date:  2019-08-22       Impact factor: 16.971

8.  Recruitment of CRISPR-Cas systems by Tn7-like transposons.

Authors:  Joseph E Peters; Kira S Makarova; Sergey Shmakov; Eugene V Koonin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-15       Impact factor: 11.205

9.  Transposon Tn7 preferentially inserts into GAA*TTC triplet repeats under conditions conducive to Y*R*Y triplex formation.

Authors:  Miriam Mancuso; Mimi C Sammarco; Ed Grabczyk
Journal:  PLoS One       Date:  2010-06-15       Impact factor: 3.240

10.  Characterization of the TnsD-attTn7 complex that promotes site-specific insertion of Tn7.

Authors:  Rupak Mitra; Gregory J McKenzie; Liang Yi; Cherline A Lee; Nancy L Craig
Journal:  Mob DNA       Date:  2010-07-23
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