Literature DB >> 18951916

Tn7 elements: engendering diversity from chromosomes to episomes.

Adam R Parks1, Joseph E Peters.   

Abstract

The bacterial transposon Tn7 maintains two distinct lifestyles, one in horizontally transferred DNA and the other in bacterial chromosomes. Access to these two DNA pools is mediated by two separate target selection pathways. The proteins involved in these pathways have evolved to specifically activate transposition into their cognate target-sites using entirely different recognition mechanisms, but the same core transposition machinery. In this review we discuss how the molecular mechanisms of Tn7-like elements contribute to their diversification and how they affect the evolution of their host genomes. The analysis of over 50 Tn7-like elements provides insight into the evolution of Tn7 and Tn7 relatives. In addition to the genes required for transposition, Tn7-like elements transport a wide variety of genes that contribute to the success of diverse organisms. We propose that by decisively moving between mobile and stationary DNA pools, Tn7-like elements accumulate a broad range of genetic material, providing a selective advantage for diverse host bacteria.

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Year:  2008        PMID: 18951916      PMCID: PMC2614081          DOI: 10.1016/j.plasmid.2008.09.008

Source DB:  PubMed          Journal:  Plasmid        ISSN: 0147-619X            Impact factor:   3.466


  75 in total

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Journal:  Antimicrob Agents Chemother       Date:  2006-08-28       Impact factor: 5.191

2.  Class 2 integron with a novel cassette array in a Burkholderia cenocepacia isolate.

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3.  Genome-wide coorientation of replication and transcription reduces adverse effects on replication in Bacillus subtilis.

Authors:  Jue D Wang; Melanie B Berkmen; Alan D Grossman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

4.  Diverse class 2 integrons in bacteria from beef cattle sources.

Authors:  Robert S Barlow; Kari S Gobius
Journal:  J Antimicrob Chemother       Date:  2006-10-25       Impact factor: 5.790

5.  Transposon Tn7 is widespread in diverse bacteria and forms genomic islands.

Authors:  Adam R Parks; Joseph E Peters
Journal:  J Bacteriol       Date:  2006-12-28       Impact factor: 3.490

6.  A Tn7-based broad-range bacterial cloning and expression system.

Authors:  Kyoung-Hee Choi; Jared B Gaynor; Kimberly G White; Carolina Lopez; Catharine M Bosio; RoxAnn R Karkhoff-Schweizer; Herbert P Schweizer
Journal:  Nat Methods       Date:  2005-06       Impact factor: 28.547

7.  mini-Tn7 insertion in bacteria with secondary, non-glmS-linked attTn7 sites: example Proteus mirabilis HI4320.

Authors:  Kyoung-Hee Choi; Herbert P Schweizer
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

8.  mini-Tn7 insertion in bacteria with multiple glmS-linked attTn7 sites: example Burkholderia mallei ATCC 23344.

Authors:  Kyoung-Hee Choi; David DeShazer; Herbert P Schweizer
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

9.  Fast, easy and efficient: site-specific insertion of transgenes into enterobacterial chromosomes using Tn7 without need for selection of the insertion event.

Authors:  Gregory J McKenzie; Nancy L Craig
Journal:  BMC Microbiol       Date:  2006-04-28       Impact factor: 3.605

10.  Dispersion of the RmInt1 group II intron in the Sinorhizobium meliloti genome upon acquisition by conjugative transfer.

Authors:  Rafael Nisa-Martínez; José I Jiménez-Zurdo; Francisco Martínez-Abarca; Estefanía Muñoz-Adelantado; Nicolás Toro
Journal:  Nucleic Acids Res       Date:  2006-12-07       Impact factor: 16.971

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  24 in total

1.  A Large Tn7-like Transposon Confers Hyper-Resistance to Copper in Pseudomonas syringae pv. syringae.

Authors:  Francesca Aprile; Zaira Heredia-Ponce; Francisco M Cazorla; Antonio de Vicente; José A Gutiérrez-Barranquero
Journal:  Appl Environ Microbiol       Date:  2020-12-23       Impact factor: 4.792

2.  An improved method for oriT-directed cloning and functionalization of large bacterial genomic regions.

Authors:  Brian H Kvitko; Ian A McMillan; Herbert P Schweizer
Journal:  Appl Environ Microbiol       Date:  2013-06-07       Impact factor: 4.792

3.  Tn917 targets the region where DNA replication terminates in Bacillus subtilis, highlighting a difference in chromosome processing in the firmicutes.

Authors:  Qiaojuan Shi; Jose C Huguet-Tapia; Joseph E Peters
Journal:  J Bacteriol       Date:  2009-10-09       Impact factor: 3.490

Review 4.  Physiology of the read-write genome.

Authors:  James A Shapiro
Journal:  J Physiol       Date:  2014-06-01       Impact factor: 5.182

5.  Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae.

Authors:  Bradd J Haley; Christopher J Grim; Nur A Hasan; Seon-Young Choi; Jongsik Chun; Thomas S Brettin; David C Bruce; Jean F Challacombe; J Chris Detter; Cliff S Han; Anwar Huq; Rita R Colwell
Journal:  BMC Microbiol       Date:  2010-05-27       Impact factor: 3.605

6.  Multi-locus sequence typing of enteroaggregative Escherichia coli isolates from Nigerian children uncovers multiple lineages.

Authors:  Iruka N Okeke; Faith Wallace-Gadsden; Hannah R Simons; Nicholas Matthews; Amy S Labar; Jennifer Hwang; John Wain
Journal:  PLoS One       Date:  2010-11-23       Impact factor: 3.240

7.  ModuleOrganizer: detecting modules in families of transposable elements.

Authors:  Sebastien Tempel; Christine Rousseau; Fariza Tahi; Jacques Nicolas
Journal:  BMC Bioinformatics       Date:  2010-09-22       Impact factor: 3.169

8.  Transposition into replicating DNA occurs through interaction with the processivity factor.

Authors:  Adam R Parks; Zaoping Li; Qiaojuan Shi; Roisin M Owens; Moonsoo M Jin; Joseph E Peters
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

Review 9.  Integrating prokaryotes and eukaryotes: DNA transposases in light of structure.

Authors:  Alison Burgess Hickman; Michael Chandler; Fred Dyda
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-02       Impact factor: 8.250

Review 10.  Targeted transposition with Tn7 elements: safe sites, mobile plasmids, CRISPR/Cas and beyond.

Authors:  Joseph E Peters
Journal:  Mol Microbiol       Date:  2019-09-18       Impact factor: 3.501

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