Literature DB >> 19693526

A hypervariable STR polymorphism in the complement factor I (CFI) gene: Asian-specific alleles.

Isao Yuasa1, Yoshito Irizawa, Hiroaki Nishimukai, Yasuo Fukumori, Kazuo Umetsu, Nori Nakayashiki, Naruya Saitou, Lotte Henke, Jürgen Henke.   

Abstract

In this study, a short tandem repeat (STR) polymorphism in intron 7 of the human complement factor I (CFI) gene was studied in 637 DNA samples obtained from African, German, Thai, and Japanese populations and German and Japanese families. A total of 41 alleles were observed and classified into two groups, L and H, based on size differences. Group H, which consisted of 16 alleles, was observed only in Thai and Japanese populations at frequencies of 0.162 and 0.116, respectively, and was strongly associated with c.1217A in exon 11 (CFI*Ah). The heterozygosity values ranged from 0.89 in German to 0.93 in Thai populations. This STR would be a useful supplementary marker for forensic individualization.

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Year:  2009        PMID: 19693526     DOI: 10.1007/s00414-009-0369-0

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  12 in total

1.  Evaluation of an extended set of 15 candidate STR loci for paternity and kinship analysis in an Austrian population sample.

Authors:  P Grubwieser; B Zimmermann; H Niederstätter; M Pavlic; M Steinlechner; W Parson
Journal:  Int J Legal Med       Date:  2006-04-28       Impact factor: 2.686

2.  A private allele ubiquitous in the Americas.

Authors:  K B Schroeder; T G Schurr; J C Long; N A Rosenberg; M H Crawford; L A Tarskaia; L P Osipova; S I Zhadanov; D G Smith
Journal:  Biol Lett       Date:  2007-04-22       Impact factor: 3.703

3.  Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans.

Authors:  Alon Keinan; James C Mullikin; Nick Patterson; David Reich
Journal:  Nat Genet       Date:  2007-09-09       Impact factor: 38.330

4.  D9S1120, a simple STR with a common Native American-specific allele: forensic optimization, locus characterization and allele frequency studies.

Authors:  C Phillips; A Rodriguez; A Mosquera-Miguel; M Fondevila; L Porras-Hurtado; F Rondon; A Salas; A Carracedo; M V Lareu
Journal:  Forensic Sci Int Genet       Date:  2008-08-26       Impact factor: 4.882

5.  Complex variability of intron 40 of the von Willebrand factor (vWF) gene.

Authors:  Sandra Hering; Christa Augustin; Jeanett Edelmann; Micaela Heidel; Kathrin Chamaon; Jan Dressler; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2007-02-02       Impact factor: 2.686

6.  New reference allelic ladders to improve allelic designation in a multiplex STR system.

Authors:  R A Griffiths; M D Barber; P E Johnson; S M Gillbard; M D Haywood; C D Smith; J Arnold; T Burke; A J Urquhart; P Gill
Journal:  Int J Legal Med       Date:  1998       Impact factor: 2.686

7.  DNA recommendations. Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics.

Authors:  W Bär; B Brinkmann; B Budowle; A Carracedo; P Gill; P Lincoln; W Mayr; B Olaisen
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

8.  Molecular basis of complement factor I (CFI) polymorphism: one of two polymorphic suballeles responsible for CFI A is Japanese-specific.

Authors:  Isao Yuasa; Mayumi Nakagawa; Kazuo Umetsu; Shinji Harihara; Aya Matsusue; Hiroaki Nishimukai; Yasuo Fukumori; Naruya Saitou; Kyung Sook Park; Feng Jin; Gérard Lucotte; Prasanta K Chattopadhyay; Lotte Henke; Jürgen Henke
Journal:  J Hum Genet       Date:  2008-09-30       Impact factor: 3.172

Review 9.  Going the distance: human population genetics in a clinal world.

Authors:  Lori J Lawson Handley; Andrea Manica; Jérôme Goudet; François Balloux
Journal:  Trends Genet       Date:  2007-07-25       Impact factor: 11.639

10.  Arlequin (version 3.0): an integrated software package for population genetics data analysis.

Authors:  Laurent Excoffier; Guillaume Laval; Stefan Schneider
Journal:  Evol Bioinform Online       Date:  2007-02-23       Impact factor: 1.625

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