Literature DB >> 17273877

Complex variability of intron 40 of the von Willebrand factor (vWF) gene.

Sandra Hering1, Christa Augustin, Jeanett Edelmann, Micaela Heidel, Kathrin Chamaon, Jan Dressler, Reinhard Szibor.   

Abstract

Intron 40 of the von Willebrand factor (vWF) gene exhibits a highly variable region of about 0.65 kb, which contains 5 juxtaposed STRs. We sequenced 0.65 kb amplicons from 68 chromosomes and found 2 frequent indel polymorphisms and 5 SNPs. The 68 chromosomes investigated here presented a total of 47 different haplotypes. Regarding the SNP allele distribution in our sample, we arranged our results of the vWF intron 40 into a system of 3 haplotypes, i.e. haplotypes a, b and c. Our review may be valuable in further optimising vWF typing in forensic applications and in avoiding pitfalls. Further attempts to develop sophisticated techniques may soon enable haplotyping using autosomale STR clusters.

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Year:  2007        PMID: 17273877     DOI: 10.1007/s00414-006-0149-z

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  26 in total

1.  VWA STR genotyping: further inconsistencies between Perkin-Elmer and Promega kits.

Authors:  C Alves; A Amorim; L Gusmão; L Pereira
Journal:  Int J Legal Med       Date:  2001-10       Impact factor: 2.686

2.  Haplotype analysis of a de novo allele at a vWF STR locus using flanking STR loci.

Authors:  A Tamura; H Tsuji; H Nishio; K Suzuki
Journal:  Leg Med (Tokyo)       Date:  1999-09       Impact factor: 1.376

3.  Prenatal exclusion without involving the putative fathers of an incestuous father-daughter parenthood.

Authors:  J Schmidtke; W Kühnau; D Wand; J Edelmann; R Szibor; M Krawczak
Journal:  Prenat Diagn       Date:  2004-08       Impact factor: 3.050

4.  Structural variations of the VWA locus in humans and comparison with non-human primates.

Authors:  K Minaguchi; O Takenaka
Journal:  Forensic Sci Int       Date:  2000-09-11       Impact factor: 2.395

5.  Sequence variation in humans and other primates at six short tandem repeat loci used in forensic identity testing.

Authors:  K Lazaruk; J Wallin; C Holt; T Nguyen; P S Walsh
Journal:  Forensic Sci Int       Date:  2001-06-01       Impact factor: 2.395

6.  Instability in the ATCT variable number tandem repeat locus VWF.VNTR I in intron 40 of von Willebrand factor gene.

Authors:  A P Haddad; R L Sparrow
Journal:  Br J Haematol       Date:  1997-09       Impact factor: 6.998

7.  Human diallelic insertion/deletion polymorphisms.

Authors:  James L Weber; Donna David; Jeremy Heil; Ying Fan; Chengfeng Zhao; Gabor Marth
Journal:  Am J Hum Genet       Date:  2002-09-04       Impact factor: 11.025

8.  MATP polymorphisms in Germans and Japanese: the L374F mutation as a population marker for Caucasoids.

Authors:  Isao Yuasa; Kazuo Umetsu; Gotaro Watanabe; Hiroaki Nakamura; Minoru Endoh; Yoshito Irizawa
Journal:  Int J Legal Med       Date:  2004-09-29       Impact factor: 2.686

9.  Different types of structural variation in STRs: HumFES/FPS, HumVWA and HumD21S11.

Authors:  A Möller; E Meyer; B Brinkmann
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

10.  Family studies and prenatal diagnosis in severe von Willebrand disease by polymerase chain reaction amplification of a variable number tandem repeat region of the von Willebrand factor gene.

Authors:  I R Peake; D Bowen; P Bignell; M B Liddell; J E Sadler; G Standen; A L Bloom
Journal:  Blood       Date:  1990-08-01       Impact factor: 22.113

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  1 in total

1.  A hypervariable STR polymorphism in the complement factor I (CFI) gene: Asian-specific alleles.

Authors:  Isao Yuasa; Yoshito Irizawa; Hiroaki Nishimukai; Yasuo Fukumori; Kazuo Umetsu; Nori Nakayashiki; Naruya Saitou; Lotte Henke; Jürgen Henke
Journal:  Int J Legal Med       Date:  2009-08-20       Impact factor: 2.686

  1 in total

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