Literature DB >> 19690338

Histone hyperacetylation within the beta-globin locus is context-dependent and precedes high-level gene expression.

George Fromm1, Christina de Vries, Rachel Byron, Jennifer Fields, Steven Fiering, Mark Groudine, M A Bender, James Palis, Michael Bulger.   

Abstract

Active gene promoters are associated with covalent histone modifications, such as hyperacetylation, which can modulate chromatin structure and stabilize binding of transcription factors that recognize these modifications. At the beta-globin locus and several other loci, however, histone hyperacetylation extends beyond the promoter, over tens of kilobases; we term such patterns of histone modifications "hyperacetylated domains." Little is known of either the mechanism by which these domains form or their function. Here, we show that domain formation within the murine beta-globin locus occurs before either high-level gene expression or erythroid commitment. Analysis of beta-globin alleles harboring deletions of promoters or the locus control region demonstrates that these sequences are not required for domain formation, suggesting the existence of additional regulatory sequences within the locus. Deletion of embryonic globin gene promoters, however, resulted in the formation of a hyperacetylated domain over these genes in definitive erythroid cells, where they are otherwise inactive. Finally, sequences within beta-globin domains exhibit hyperacetylation in a context-dependent manner, and domains are maintained when transcriptional elongation is inhibited. These data narrow the range of possible mechanisms by which hyperacetylated domains form.

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Year:  2009        PMID: 19690338      PMCID: PMC2765682          DOI: 10.1182/blood-2009-03-210690

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  42 in total

1.  Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain.

Authors:  E C Forsberg; K M Downs; H M Christensen; H Im; P A Nuzzi; E H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

Authors:  J Gribnau; K Diderich; S Pruzina; R Calzolari; P Fraser
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

Review 3.  Histone acetylation beyond promoters: long-range acetylation patterns in the chromatin world.

Authors:  E C Forsberg; E H Bresnick
Journal:  Bioessays       Date:  2001-09       Impact factor: 4.345

4.  Identification of a conserved erythroid specific domain of histone acetylation across the alpha-globin gene cluster.

Authors:  E Anguita; C A Johnson; W G Wood; B M Turner; D R Higgs
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

Review 5.  Molecular biology. Chromatin higher order folding--wrapping up transcription.

Authors:  Peter J Horn; Craig L Peterson
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

Review 6.  Dynamics of histone acetylation in vivo. A function for acetylation turnover?

Authors:  Jakob H Waterborg
Journal:  Biochem Cell Biol       Date:  2002       Impact factor: 3.626

Review 7.  Molecular implementation and physiological roles for histone H3 lysine 4 (H3K4) methylation.

Authors:  Ali Shilatifard
Journal:  Curr Opin Cell Biol       Date:  2008-05-26       Impact factor: 8.382

8.  The murine beta-globin locus control region regulates the rate of transcription but not the hyperacetylation of histones at the active genes.

Authors:  D Schübeler; M Groudine; M A Bender
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

9.  Beta-globin gene switching and DNase I sensitivity of the endogenous beta-globin locus in mice do not require the locus control region.

Authors:  M A Bender; M Bulger; J Close; M Groudine
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

10.  The histone acetyltransferase PCAF associates with actin and hnRNP U for RNA polymerase II transcription.

Authors:  Ales Obrdlik; Alexander Kukalev; Emilie Louvet; Ann-Kristin Ostlund Farrants; Luca Caputo; Piergiorgio Percipalle
Journal:  Mol Cell Biol       Date:  2008-08-18       Impact factor: 4.272

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  8 in total

1.  Prevention of transcriptional silencing by a replicator-binding complex consisting of SWI/SNF, MeCP1, and hnRNP C1/C2.

Authors:  Liang Huang; Haiqing Fu; Chii Mei Lin; Amy L Conner; Ya Zhang; Mirit I Aladjem
Journal:  Mol Cell Biol       Date:  2011-06-20       Impact factor: 4.272

2.  Gene induction and repression during terminal erythropoiesis are mediated by distinct epigenetic changes.

Authors:  Piu Wong; Shilpa M Hattangadi; Albert W Cheng; Garrett M Frampton; Richard A Young; Harvey F Lodish
Journal:  Blood       Date:  2011-08-22       Impact factor: 22.113

3.  Transcription factors KLF1 and KLF2 positively regulate embryonic and fetal beta-globin genes through direct promoter binding.

Authors:  Yousef N Alhashem; Divya S Vinjamur; Mohua Basu; Ursula Klingmüller; Karin M L Gaensler; Joyce A Lloyd
Journal:  J Biol Chem       Date:  2011-05-24       Impact factor: 5.157

4.  An embryonic stage-specific enhancer within the murine β-globin locus mediates domain-wide histone hyperacetylation.

Authors:  George Fromm; Brenda Cadiz-Rivera; Christina de Vries; Michael Getman; Kathleen E McGrath; Paul D Kingsley; Jennifer Fields; Steven Fiering; Michael Bulger
Journal:  Blood       Date:  2011-02-14       Impact factor: 22.113

Review 5.  Nucleosome Dancing at the Tempo of Histone Tail Acetylation.

Authors:  Angélique Galvani; Christophe Thiriet
Journal:  Genes (Basel)       Date:  2015-07-15       Impact factor: 4.096

6.  Chromatin looping and eRNA transcription precede the transcriptional activation of gene in the β-globin locus.

Authors:  Yea Woon Kim; Sungkung Lee; Jangmi Yun; AeRi Kim
Journal:  Biosci Rep       Date:  2015-03-18       Impact factor: 3.840

7.  The chromatin "landscape" of a murine adult β-globin gene is unaffected by deletion of either the gene promoter or a downstream enhancer.

Authors:  Brenda Cadiz-Rivera; George Fromm; Christina de Vries; Jennifer Fields; Kathleen E McGrath; Steven Fiering; Michael Bulger
Journal:  PLoS One       Date:  2014-05-09       Impact factor: 3.240

8.  Temporal expression of MOF acetyltransferase primes transcription factor networks for erythroid fate.

Authors:  Cecilia Pessoa Rodrigues; Josip Stefan Herman; Benjamin Herquel; Claudia Isabelle Keller Valsecchi; Thomas Stehle; Dominic Grün; Asifa Akhtar
Journal:  Sci Adv       Date:  2020-05-20       Impact factor: 14.136

  8 in total

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