Literature DB >> 21321362

An embryonic stage-specific enhancer within the murine β-globin locus mediates domain-wide histone hyperacetylation.

George Fromm1, Brenda Cadiz-Rivera, Christina de Vries, Michael Getman, Kathleen E McGrath, Paul D Kingsley, Jennifer Fields, Steven Fiering, Michael Bulger.   

Abstract

In mammalian nuclei, a select number of tissue-specific gene loci exhibit broadly distributed patterns of histone modifications, such as histone hyperacetylation, that are normally associated with active gene promoters. Previously, we characterized such hyperacetylated domains within mammalian β-globin gene loci, and determined that within the murine locus, neither the β-globin locus control region nor the gene promoters were required for domain formation. Here, we identify a developmentally specific erythroid enhancer, hypersensitive site-embryonic 1 (HS-E1), located within the embryonic β-globin domain in mouse, which is homologous to a region located downstream of the human embryonic ε-globin gene. This sequence exhibits nuclease hypersensitivity in primitive erythroid cells and acts as an enhancer in gain-of-function assays. Deletion of HS-E1 from the endogenous murine β-globin locus results in significant decrease in the expression of the embryonic β-globin genes and loss of the domain-wide pattern of histone hyperacetylation. The data suggest that HS-E1 is an enhancer that is uniquely required for β-like globin expression in primitive erythroid cells, and that it defines a novel class of enhancer that works in part by domain-wide modulation of chromatin structure.

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Year:  2011        PMID: 21321362      PMCID: PMC3109543          DOI: 10.1182/blood-2010-08-302018

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  22 in total

Review 1.  Globin gene switching in primates.

Authors:  Robert M Johnson; Deborah Gumucio; Morris Goodman
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2002-11       Impact factor: 2.320

Review 2.  Controlling the double helix.

Authors:  Gary Felsenfeld; Mark Groudine
Journal:  Nature       Date:  2003-01-23       Impact factor: 49.962

3.  A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus.

Authors:  Michael Bulger; Dirk Schübeler; M A Bender; Joan Hamilton; Catherine M Farrell; Ross C Hardison; Mark Groudine
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

Review 4.  Gene regulation by proteins acting nearby and at a distance.

Authors:  M Ptashne
Journal:  Nature       Date:  1986 Aug 21-27       Impact factor: 49.962

Review 5.  Histone acetylation and deacetylation in yeast.

Authors:  Siavash K Kurdistani; Michael Grunstein
Journal:  Nat Rev Mol Cell Biol       Date:  2003-04       Impact factor: 94.444

6.  A cre-transgenic mouse strain for the ubiquitous deletion of loxP-flanked gene segments including deletion in germ cells.

Authors:  F Schwenk; U Baron; K Rajewsky
Journal:  Nucleic Acids Res       Date:  1995-12-25       Impact factor: 16.971

7.  A transient definitive erythroid lineage with unique regulation of the β-globin locus in the mammalian embryo.

Authors:  Kathleen E McGrath; Jenna M Frame; George J Fromm; Anne D Koniski; Paul D Kingsley; Jane Little; Michael Bulger; James Palis
Journal:  Blood       Date:  2011-03-04       Impact factor: 22.113

8.  Beta-globin gene switching and DNase I sensitivity of the endogenous beta-globin locus in mice do not require the locus control region.

Authors:  M A Bender; M Bulger; J Close; M Groudine
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

9.  A defined locus control region determinant links chromatin domain acetylation with long-range gene activation.

Authors:  Yugong Ho; Felice Elefant; Nancy Cooke; Stephen Liebhaber
Journal:  Mol Cell       Date:  2002-02       Impact factor: 17.970

10.  Yolk sac-derived primitive erythroblasts enucleate during mammalian embryogenesis.

Authors:  Paul D Kingsley; Jeffrey Malik; Katherine A Fantauzzo; James Palis
Journal:  Blood       Date:  2004-03-18       Impact factor: 22.113

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  6 in total

Review 1.  In search of the determinants of enhancer-promoter interaction specificity.

Authors:  Joris van Arensbergen; Bas van Steensel; Harmen J Bussemaker
Journal:  Trends Cell Biol       Date:  2014-08-24       Impact factor: 20.808

2.  Inactivation of intergenic enhancers by EBNA3A initiates and maintains polycomb signatures across a chromatin domain encoding CXCL10 and CXCL9.

Authors:  Marie L Harth-Hertle; Barbara A Scholz; Florian Erhard; Laura V Glaser; Lars Dölken; Ralf Zimmer; Bettina Kempkes
Journal:  PLoS Pathog       Date:  2013-09-19       Impact factor: 6.823

3.  Recruitment of transcription complexes to enhancers and the role of enhancer transcription.

Authors:  Jared S Stees; Fred Varn; Suming Huang; John Strouboulis; Jörg Bungert
Journal:  Biology (Basel)       Date:  2012-12-05

Review 4.  The modern primitives: applying new technological approaches to explore the biology of the earliest red blood cells.

Authors:  Stuart T Fraser
Journal:  ISRN Hematol       Date:  2013-10-03

5.  The chromatin "landscape" of a murine adult β-globin gene is unaffected by deletion of either the gene promoter or a downstream enhancer.

Authors:  Brenda Cadiz-Rivera; George Fromm; Christina de Vries; Jennifer Fields; Kathleen E McGrath; Steven Fiering; Michael Bulger
Journal:  PLoS One       Date:  2014-05-09       Impact factor: 3.240

6.  Identification of a Novel Enhancer/Chromatin Opening Element Associated with High-Level γ-Globin Gene Expression.

Authors:  Yong Shen; MacLean A Bassett; Aishwarya Gurumurthy; Rukiye Nar; Isaac J Knudson; Cameron R Guy; Alex Perez; Russell W Mellen; Masatoshi Ikeda; Mir A Hossain; Suming Huang; Kazuhiko Igarashi; Jörg Bungert
Journal:  Mol Cell Biol       Date:  2018-09-14       Impact factor: 4.272

  6 in total

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