Literature DB >> 12228709

Molecular biology. Chromatin higher order folding--wrapping up transcription.

Peter J Horn1, Craig L Peterson.   

Abstract

Eukaryotic genomes are organized into condensed, heterogeneous chromatin fibers throughout much of the cell cycle. Here we describe recent studies indicating that even transcriptionally active loci may be encompassed within 80- to 100-nanometer-thick chromonema fibers. These studies suggest that chromatin higher order folding may be a key feature of eukaryotic transcriptional control. We also discuss evidence suggesting that adenosine-5'-triphosphate-dependent chromatin-remodeling enzymes and histone-modifying enzymes may regulate transcription by controlling the extent and dynamics of chromatin higher order folding.

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Year:  2002        PMID: 12228709     DOI: 10.1126/science.1074200

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  126 in total

1.  The linker histone homolog Hho1p from Saccharomyces cerevisiae represents a winged helix-turn-helix fold as determined by NMR spectroscopy.

Authors:  Katsuki Ono; Osamu Kusano; Sakurako Shimotakahara; Mitsuhiro Shimizu; Toshimasa Yamazaki; Heisaburo Shindo
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

2.  Topography of genetic loci in the nuclei of cells of colorectal carcinoma and adjacent tissue of colonic epithelium.

Authors:  Emilie Lukásová; Stanislav Kozubek; Martin Falk; Michal Kozubek; Jan Zaloudík; Václav Vagunda; Zdenek Pavlovský
Journal:  Chromosoma       Date:  2004-01-13       Impact factor: 4.316

3.  A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus.

Authors:  Michael Bulger; Dirk Schübeler; M A Bender; Joan Hamilton; Catherine M Farrell; Ross C Hardison; Mark Groudine
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

4.  Spurious spatial periodicity of co-expression in microarray data due to printing design.

Authors:  Gábor Balázsi; Krin A Kay; Albert-László Barabási; Zoltán N Oltvai
Journal:  Nucleic Acids Res       Date:  2003-08-01       Impact factor: 16.971

5.  Unexpected binding motifs for subnucleosomal particles revealed by atomic force microscopy.

Authors:  Dessy N Nikova; Lisa H Pope; Martin L Bennink; Kirsten A van Leijenhorst-Groener; Kees van der Werf; Jan Greve
Journal:  Biophys J       Date:  2004-09-17       Impact factor: 4.033

6.  Sequential histone modifications at Hoxd4 regulatory regions distinguish anterior from posterior embryonic compartments.

Authors:  Mojgan Rastegar; Laila Kobrossy; Erzsebet Nagy Kovacs; Isabel Rambaldi; Mark Featherstone
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

7.  Clinical and pathologic impact of select chromatin-modulating tumor suppressors in clear cell renal cell carcinoma.

Authors:  A Ari Hakimi; Ying-Bei Chen; James Wren; Mithat Gonen; Omar Abdel-Wahab; Adriana Heguy; Han Liu; Shugaku Takeda; Satish K Tickoo; Victor E Reuter; Martin H Voss; Robert J Motzer; Jonathan A Coleman; Emily H Cheng; Paul Russo; James J Hsieh
Journal:  Eur Urol       Date:  2012-09-27       Impact factor: 20.096

Review 8.  Role of chromatin states in transcriptional memory.

Authors:  Sharmistha Kundu; Craig L Peterson
Journal:  Biochim Biophys Acta       Date:  2009-02-21

9.  Generic features of tertiary chromatin structure as detected in natural chromosomes.

Authors:  Waltraud G Müller; Dietmar Rieder; Gregor Kreth; Christoph Cremer; Zlatko Trajanoski; James G McNally
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

10.  Compaction of Single-Molecule Megabase-Long Chromatin under the Influence of Macromolecular Crowding.

Authors:  Anatoly Zinchenko; Nikolay V Berezhnoy; Qinming Chen; Lars Nordenskiöld
Journal:  Biophys J       Date:  2018-05-03       Impact factor: 4.033

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