Literature DB >> 19685144

In vivo biosynthesis of an Ala-scan library based on the cyclic peptide SFTI-1.

Jeffrey Austin1, Richard H Kimura, Youn-Hi Woo, Julio A Camarero.   

Abstract

We present the in vivo biosynthesis of wild-type sunflower trypsin inhibitor 1 (SFTI-1) inside E. coli cells using an intramolecular native chemical ligation in combination with a modified protein splicing unit. SFTI-1 is a small backbone cyclized polypeptide with a single disulfide bridge. A small library containing multiple Ala mutants was also biosynthesized and its activity was assayed using a trypsin-binding assay. This study clearly demonstrates the exciting possibility of generating large cyclic peptide libraries in live E. coli cells, and is a critical first step for developing in vivo screening and directed evolution technologies using the cyclic peptide SFTI-1 as a molecular scaffold.

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Year:  2009        PMID: 19685144      PMCID: PMC2936557          DOI: 10.1007/s00726-009-0338-4

Source DB:  PubMed          Journal:  Amino Acids        ISSN: 0939-4451            Impact factor:   3.520


  32 in total

1.  Circular beta-lactamase: stability enhancement by cyclizing the backbone.

Authors:  H Iwai; A Plückthun
Journal:  FEBS Lett       Date:  1999-10-08       Impact factor: 4.124

2.  High-resolution structure of a potent, cyclic proteinase inhibitor from sunflower seeds.

Authors:  S Luckett; R S Garcia; J J Barker; A V Konarev; P R Shewry; A R Clarke; R L Brady
Journal:  J Mol Biol       Date:  1999-07-09       Impact factor: 5.469

Review 3.  Constrained peptides: models of bioactive peptides and protein substructures.

Authors:  J Rizo; L M Gierasch
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

4.  Design, synthesis and analysis of novel bicyclic and bifunctional protease inhibitors.

Authors:  Agnès M Jaulent; Robin J Leatherbarrow
Journal:  Protein Eng Des Sel       Date:  2004-10-14       Impact factor: 1.650

5.  Expressed protein ligation, a novel method for studying protein-protein interactions in transcription.

Authors:  K Severinov; T W Muir
Journal:  J Biol Chem       Date:  1998-06-26       Impact factor: 5.157

6.  Semisynthesis of cytotoxic proteins using a modified protein splicing element.

Authors:  T C Evans; J Benner; M Q Xu
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

Review 7.  Emerging approaches in the molecular design of receptor-selective peptide ligands: conformational, topographical and dynamic considerations.

Authors:  V J Hruby; F al-Obeidi; W Kazmierski
Journal:  Biochem J       Date:  1990-06-01       Impact factor: 3.857

8.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

Review 9.  Sunflower trypsin inhibitor-1.

Authors:  Michael L J Korsinczky; Horst Joachim Schirra; David J Craik
Journal:  Curr Protein Pept Sci       Date:  2004-10       Impact factor: 3.272

10.  Protein trans-splicing by a split intein encoded in a split DnaE gene of Synechocystis sp. PCC6803.

Authors:  H Wu; Z Hu; X Q Liu
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

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  27 in total

1.  Biosynthesis and antimicrobial evaluation of backbone-cyclized α-defensins.

Authors:  Angie E Garcia; Kenneth P Tai; Shadakshara S Puttamadappa; Alexander Shekhtman; Andre J Ouellette; Julio A Camarero
Journal:  Biochemistry       Date:  2011-11-09       Impact factor: 3.162

Review 2.  Biological synthesis of circular polypeptides.

Authors:  Teshome L Aboye; Julio A Camarero
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

3.  Rapid parallel synthesis of bioactive folded cyclotides by using a tea-bag approach.

Authors:  Teshome Aboye; Yuting Kuang; Nouri Neamati; Julio A Camarero
Journal:  Chembiochem       Date:  2015-02-06       Impact factor: 3.164

Review 4.  Using backbone-cyclized Cys-rich polypeptides as molecular scaffolds to target protein-protein interactions.

Authors:  Dipankar Chaudhuri; Teshome Aboye; Julio A Camarero
Journal:  Biochem J       Date:  2019-01-11       Impact factor: 3.857

5.  Efficient one-pot cyclization/folding of Rhesus θ-defensin-1 (RTD-1).

Authors:  Teshome L Aboye; Yilong Li; Subhabrata Majumder; Jinfeng Hao; Alexander Shekhtman; Julio A Camarero
Journal:  Bioorg Med Chem Lett       Date:  2012-03-02       Impact factor: 2.823

6.  Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis.

Authors:  Giang K T Nguyen; Shujing Wang; Yibo Qiu; Xinya Hemu; Yilong Lian; James P Tam
Journal:  Nat Chem Biol       Date:  2014-07-20       Impact factor: 15.040

Review 7.  Intein applications: from protein purification and labeling to metabolic control methods.

Authors:  David W Wood; Julio A Camarero
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

8.  Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions.

Authors:  Krishnappa Jagadish; Radhika Borra; Vanessa Lacey; Subhabrata Majumder; Alexander Shekhtman; Lei Wang; Julio A Camarero
Journal:  Angew Chem Int Ed Engl       Date:  2013-01-15       Impact factor: 15.336

9.  The role of imidazole in peptide cyclization by transesterification: parallels to the catalytic triads of serine proteases.

Authors:  Kendall G Byler; Yangmei Li; Richard A Houghten; Karina Martinez-Mayorga
Journal:  Org Biomol Chem       Date:  2013-05-14       Impact factor: 3.876

10.  Design of a novel cyclotide-based CXCR4 antagonist with anti-human immunodeficiency virus (HIV)-1 activity.

Authors:  Teshome L Aboye; Helen Ha; Subhabrata Majumder; Frauke Christ; Zeger Debyser; Alexander Shekhtman; Nouri Neamati; Julio A Camarero
Journal:  J Med Chem       Date:  2012-11-27       Impact factor: 7.446

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