Literature DB >> 19671731

Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake.

Martin W Hahn1, Vojtěch Kasalický2, Jan Jezbera2,1, Ulrike Brandt1, Jitka Jezberová2,1, Karel Šimek2.   

Abstract

A chemo-organotrophic, aerobic, facultatively anaerobic, non-motile strain, MWH-C5(T), isolated from the water column of the oligomesotrophic Lake Mondsee (Austria), was characterized phenotypically, phylogenetically and chemotaxonomically. The predominant fatty acids of the strain were C(16 : 1)omega7c/omega6c, C(16 : 0), C(12 : 1) and C(8 : 0)-3OH, the major quinone was ubiquinone Q-8 and the G+C content of the DNA of the strain was 55.5 mol%. 16S rRNA gene similarity to the closest related type strains was 96.6 % (Curvibacter delicatus LMG 4328(T)) and 95.7 % (Rhodoferax fermentans FR3(T)). Phylogenetic analysis of 16S rRNA gene sequences revealed the affiliation of the strain with the family Comamonadaceae (Betaproteobacteria); however, the phylogenetic position of the strain did not support an affiliation to any previously described genus within this family. A family-wide comparison of traits revealed that the strain possesses a unique combination of DNA G+C content, major fatty acids and major 3-hydroxy fatty acid. Furthermore, the strain differs in several traits from the closest related genera. Based on the phylogeny of the strain and differences from closely related genera, we propose to establish the new genus and species Limnohabitans curvus gen. nov., sp. nov. to accommodate this strain. The type strain of Limnohabitans curvus is MWH-C5(T) (=DSM 21645(T) =CCUG 56720(T)). The type strain is closely related to a large number of uncultured bacteria detected by cultivation-independent methods in various freshwater systems.

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Year:  2009        PMID: 19671731      PMCID: PMC3091418          DOI: 10.1099/ijs.0.013292-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  31 in total

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2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
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Review 3.  The microbial diversity of inland waters.

Authors:  Martin W Hahn
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4.  Tepidicella xavieri gen. nov., sp. nov., a betaproteobacterium isolated from a hot spring runoff.

Authors:  Luis França; Fred A Rainey; M Fernanda Nobre; Milton S da Costa
Journal:  Int J Syst Evol Microbiol       Date:  2006-04       Impact factor: 2.747

5.  It's all relative: ranking the diversity of aquatic bacterial communities.

Authors:  Allison K Shaw; Aaron L Halpern; Karen Beeson; Bao Tran; J Craig Venter; Jennifer B H Martiny
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6.  Polaromonas vacuolata gen. nov., sp. nov., a psychrophilic, marine, gas vacuolate bacterium from Antarctica.

Authors:  R L Irgens; J J Gosink; J T Staley
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7.  Ramlibacter tataouinensis gen. nov., sp. nov., and Ramlibacter henchirensis sp. nov., cyst-producing bacteria isolated from subdesert soil in Tunisia.

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Journal:  Int J Syst Evol Microbiol       Date:  2003-03       Impact factor: 2.747

8.  Variovorax dokdonensis sp. nov., isolated from soil.

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Journal:  Int J Syst Evol Microbiol       Date:  2006-04       Impact factor: 2.747

9.  Polaromonas jejuensis sp. nov., isolated from soil in Korea.

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Journal:  Int J Syst Evol Microbiol       Date:  2008-07       Impact factor: 2.747

10.  Polaromonas naphthalenivorans sp. nov., a naphthalene-degrading bacterium from naphthalene-contaminated sediment.

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Journal:  Int J Syst Evol Microbiol       Date:  2004-01       Impact factor: 2.747

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  26 in total

1.  Assessing niche separation among coexisting Limnohabitans strains through interactions with a competitor, viruses, and a bacterivore.

Authors:  Karel Simek; Vojtech Kasalický; Karel Hornák; Martin W Hahn; Markus G Weinbauer
Journal:  Appl Environ Microbiol       Date:  2009-12-28       Impact factor: 4.792

2.  Broad habitat range of the phylogenetically narrow R-BT065 cluster, representing a core group of the Betaproteobacterial genus Limnohabitans.

Authors:  Karel Simek; Vojtech Kasalicky; Jan Jezbera; Jitka Jezberová; Josef Hejzlar; Martin W Hahn
Journal:  Appl Environ Microbiol       Date:  2009-11-30       Impact factor: 4.792

Review 3.  A guide to the natural history of freshwater lake bacteria.

Authors:  Ryan J Newton; Stuart E Jones; Alexander Eiler; Katherine D McMahon; Stefan Bertilsson
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

4.  Coherent dynamics and association networks among lake bacterioplankton taxa.

Authors:  Alexander Eiler; Friederike Heinrich; Stefan Bertilsson
Journal:  ISME J       Date:  2011-09-01       Impact factor: 10.302

5.  Bacterial and Archaeal Diversities in Maotai Section of the Chishui River, China.

Authors:  Qingqing Feng; Lu Han; Xu Tan; Yali Zhang; Tianyi Meng; Jun Lu; Jie Lv
Journal:  Curr Microbiol       Date:  2016-09-27       Impact factor: 2.188

6.  Seasonal variations in bacterioplankton community structures in two small rivers in the Himi region of central Japan and their relationships with environmental factors.

Authors:  Daisuke Tanaka; Toyo Takahashi; Yoko Yamashiro; Hitoshi Tanaka; Yuzuru Kimochi; Masaki Nishio; Akihiro Sakatoku; Shogo Nakamura
Journal:  World J Microbiol Biotechnol       Date:  2017-11-13       Impact factor: 3.312

7.  The Limnohabitans Genus Harbors Generalistic and Opportunistic Subtypes: Evidence from Spatiotemporal Succession in a Canyon-Shaped Reservoir.

Authors:  Jitka Jezberová; Jan Jezbera; Petr Znachor; Jiří Nedoma; Vojtěch Kasalický; Karel Šimek
Journal:  Appl Environ Microbiol       Date:  2017-10-17       Impact factor: 4.792

8.  Diversity and Cyclical Seasonal Transitions in the Bacterial Community in a Large and Deep Perialpine Lake.

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Journal:  Microb Ecol       Date:  2017-12-01       Impact factor: 4.552

9.  Aerobic Anoxygenic Photosynthesis Is Commonly Present within the Genus Limnohabitans.

Authors:  Vojtěch Kasalický; Yonghui Zeng; Kasia Piwosz; Karel Šimek; Hana Kratochvilová; Michal Koblížek
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

10.  Contrasting trends in distribution of four major planktonic betaproteobacterial groups along a pH gradient of epilimnia of 72 freshwater habitats.

Authors:  Jan Jezbera; Jitka Jezberová; Ulrike Koll; Karel Horňák; Karel Šimek; Martin W Hahn
Journal:  FEMS Microbiol Ecol       Date:  2012-04-23       Impact factor: 4.194

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