Literature DB >> 19656697

Observation of restricted diffusion in the presence of a free diffusion compartment: single- and double-PFG experiments.

Noam Shemesh1, Evren Ozarslan, Amnon Bar-Shir, Peter J Basser, Yoram Cohen.   

Abstract

Theoretical and experimental studies of restricted diffusion have been conducted for decades using single pulsed field gradient (s-PFG) diffusion experiments. In homogenous samples, the diffusion-diffraction phenomenon arising from a single population of diffusing species has been observed experimentally and predicted theoretically. In this study, we introduce a composite bi-compartmental model which superposes restricted diffusion in microcapillaries with free diffusion in an unconfined compartment, leading to fast and slow diffusing components in the NMR signal decay. Although simplified (no exchange), the superposed diffusion modes in this model may exhibit features seen in more complex porous materials and biological tissues. We find that at low q-values the freely diffusing component masks the restricted diffusion component, and that prolongation of the diffusion time shifts the transition from free to restricted profiles to lower q-values. The effect of increasing the volume fraction of freely diffusing water was also studied; we find that the transition in the signal decay from the free mode to the restricted mode occurs at higher q-values when the volume fraction of the freely diffusing water is increased. These findings were then applied to a phantom consisting of crossing fibers, which demonstrated the same qualitative trends in the signal decay. The angular d-PGSE experiment, which has been recently shown to be able to measure small compartmental dimensions even at low q-values, revealed that microscopic anisotropy is lost at low q-values where the fast diffusing component is prominent. Our findings may be of importance in studying realistic systems which exhibit compartmentation.

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Year:  2009        PMID: 19656697      PMCID: PMC2749951          DOI: 10.1016/j.jmr.2009.07.005

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  47 in total

1.  Displacement imaging of spinal cord using q-space diffusion-weighted MRI.

Authors:  Y Assaf; A Mayk; Y Cohen
Journal:  Magn Reson Med       Date:  2000-11       Impact factor: 4.668

2.  Two-dimensional NMR of velocity exchange: VEXSY and SERPENT.

Authors:  B Blümich; P T Callaghan; R A Damion; S Han; A A Khrapitchev; K J Packer; S Stapf
Journal:  J Magn Reson       Date:  2001-09       Impact factor: 2.229

3.  On the use of 2D correlation and exchange NMR spectroscopy in organic porous materials.

Authors:  Petrik Galvosas; Ying Qiao; Monika Schönhoff; Paul T Callaghan
Journal:  Magn Reson Imaging       Date:  2007-01-18       Impact factor: 2.546

4.  Diffusive diffraction measurements in porous media: effect of structural disorder and internal magnetic field gradients.

Authors:  Jean-François Kuntz; Pascal Palmas; Daniel Canet
Journal:  J Magn Reson       Date:  2007-08-19       Impact factor: 2.229

5.  A general framework to quantify the effect of restricted diffusion on the NMR signal with applications to double pulsed field gradient NMR experiments.

Authors:  Evren Ozarslan; Noam Shemesh; Peter J Basser
Journal:  J Chem Phys       Date:  2009-03-14       Impact factor: 3.488

6.  Crossing fibers, diffractions and nonhomogeneous magnetic field: correction of artifacts by bipolar gradient pulses.

Authors:  Amnon Bar-Shir; Yoram Cohen
Journal:  Magn Reson Imaging       Date:  2008-05-16       Impact factor: 2.546

7.  Microscopic anisotropy revealed by NMR double pulsed field gradient experiments with arbitrary timing parameters.

Authors:  Evren Ozarslan; Peter J Basser
Journal:  J Chem Phys       Date:  2008-04-21       Impact factor: 3.488

8.  NMR "diffusion-diffraction" of water revealing alignment of erythrocytes in a magnetic field and their dimensions and membrane transport characteristics.

Authors:  P W Kuchel; A Coy; P Stilbs
Journal:  Magn Reson Med       Date:  1997-05       Impact factor: 4.668

9.  Anisotropic diffusion of metabolites in peripheral nerve using diffusion weighted magnetic resonance spectroscopy at ultra-high field.

Authors:  Jacob Ellegood; Ryan T McKay; Chris C Hanstock; Christian Beaulieu
Journal:  J Magn Reson       Date:  2006-10-05       Impact factor: 2.229

10.  Compartment shape anisotropy (CSA) revealed by double pulsed field gradient MR.

Authors:  Evren Ozarslan
Journal:  J Magn Reson       Date:  2009-04-10       Impact factor: 2.229

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  13 in total

1.  Noninvasive bipolar double-pulsed-field-gradient NMR reveals signatures for pore size and shape in polydisperse, randomly oriented, inhomogeneous porous media.

Authors:  Noam Shemesh; Evren Ozarslan; Tal Adiri; Peter J Basser; Yoram Cohen
Journal:  J Chem Phys       Date:  2010-07-28       Impact factor: 3.488

2.  Double pulsed field gradient (double-PFG) MR imaging (MRI) as a means to measure the size of plant cells.

Authors:  E Özarslan; M E Komlosh; M J Lizak; F Horkay; P J Basser
Journal:  Magn Reson Chem       Date:  2011-12       Impact factor: 2.447

3.  JEDI: Joint Estimation Diffusion Imaging of macroscopic and microscopic tissue properties.

Authors:  Lawrence R Frank; Benjamin Zahneisen; Vitaly L Galinsky
Journal:  Magn Reson Med       Date:  2020-01-09       Impact factor: 4.668

Review 4.  Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Authors:  Dmitry S Novikov; Els Fieremans; Sune N Jespersen; Valerij G Kiselev
Journal:  NMR Biomed       Date:  2018-10-15       Impact factor: 4.044

5.  Pore diameter mapping using double pulsed-field gradient MRI and its validation using a novel glass capillary array phantom.

Authors:  Michal E Komlosh; Evren Özarslan; Martin J Lizak; Ferenc Horkay; Vincent Schram; Noam Shemesh; Yoram Cohen; Peter J Basser
Journal:  J Magn Reson       Date:  2010-10-26       Impact factor: 2.229

6.  Accurate noninvasive measurement of cell size and compartment shape anisotropy in yeast cells using double-pulsed field gradient MR.

Authors:  Noam Shemesh; Evren Özarslan; Peter J Basser; Yoram Cohen
Journal:  NMR Biomed       Date:  2011-07-22       Impact factor: 4.044

Review 7.  From single-pulsed field gradient to double-pulsed field gradient MR: gleaning new microstructural information and developing new forms of contrast in MRI.

Authors:  Noam Shemesh; Evren Ozarslan; Michal E Komlosh; Peter J Basser; Yoram Cohen
Journal:  NMR Biomed       Date:  2010-08       Impact factor: 4.044

8.  Mapping average axon diameters in porcine spinal cord white matter and rat corpus callosum using d-PFG MRI.

Authors:  M E Komlosh; E Özarslan; M J Lizak; I Horkayne-Szakaly; R Z Freidlin; F Horkay; P J Basser
Journal:  Neuroimage       Date:  2013-04-10       Impact factor: 6.556

9.  Detecting diffusion-diffraction patterns in size distribution phantoms using double-pulsed field gradient NMR: Theory and experiments.

Authors:  Noam Shemesh; Evren Ozarslan; Peter J Basser; Yoram Cohen
Journal:  J Chem Phys       Date:  2010-01-21       Impact factor: 3.488

10.  Characterizing magnetic resonance signal decay due to Gaussian diffusion: the path integral approach and a convenient computational method.

Authors:  Evren Özarslan; Carl-Fredrik Westin; Thomas H Mareci
Journal:  Concepts Magn Reson Part A Bridg Educ Res       Date:  2015-12-21       Impact factor: 0.481

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