Literature DB >> 19650882

From small hosts come big viruses: the complete genome of a second Ostreococcus tauri virus, OtV-1.

Karen D Weynberg1, Michael J Allen, Kevin Ashelford, David J Scanlan, William H Wilson.   

Abstract

Ostreococcus tauri virus (OtV-1) is a large double-stranded DNA virus and a prospective member of the family Phycodnaviridae, genus Prasinovirus. OtV-1 infects the unicellular marine green alga O. tauri, the smallest known free-living eukaryote. Here we present the 191 761 base pair genome sequence of OtV-1, which has 232 putative protein-encoding and 4 tRNA-encoding genes. Approximately 31% of the viral gene products exhibit a similarity to proteins of known functions in public databases. These include a variety of unexpected genes, for example, a PhoH-like protein, a N-myristoyltransferase, a 3-dehydroquinate synthase, a number of glycosyltransferases and methyltransferases, a prolyl 4-hydroxylase, 6-phosphofructokinase and a total of 8 capsid proteins. A total of 11 predicted genes share homology with genes found in the Ostreococcus host genome. In addition, an intein was identified in the DNA polymerase gene of OtV-1. This is the first report of an intein in the genome of a virus that infects O. tauri. Fifteen core genes common to nuclear-cytoplasmic large dsDNA virus (NCLDV) genomes were identified in the OtV-1 genome. This new sequence data may help to redefine the classification of the core genes of these viruses and shed new light on their evolutionary history.

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Year:  2009        PMID: 19650882     DOI: 10.1111/j.1462-2920.2009.01991.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  32 in total

1.  Genome sequence of Ostreococcus tauri virus OtV-2 throws light on the role of picoeukaryote niche separation in the ocean.

Authors:  Karen D Weynberg; Michael J Allen; Ilana C Gilg; David J Scanlan; William H Wilson
Journal:  J Virol       Date:  2011-02-02       Impact factor: 5.103

2.  Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species specific.

Authors:  Camille Clerissi; Yves Desdevises; Nigel Grimsley
Journal:  J Virol       Date:  2012-02-08       Impact factor: 5.103

Review 3.  Potassium ion channels: could they have evolved from viruses?

Authors:  Gerhard Thiel; Anna Moroni; Guillaume Blanc; James L Van Etten
Journal:  Plant Physiol       Date:  2013-05-29       Impact factor: 8.340

4.  Variations in abundance, genome size, morphology, and functional role of the virioplankton in Lakes Annecy and Bourget over a 1-year period.

Authors:  Xu Zhong; Angia Siram Pradeep Ram; Jonathan Colombet; Stéphan Jacquet
Journal:  Microb Ecol       Date:  2013-11-20       Impact factor: 4.552

5.  Development of phoH as a novel signature gene for assessing marine phage diversity.

Authors:  Dawn B Goldsmith; Giuseppe Crosti; Bhakti Dwivedi; Lauren D McDaniel; Arvind Varsani; Curtis A Suttle; Markus G Weinbauer; Ruth-Anne Sandaa; Mya Breitbart
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

6.  Global morphological analysis of marine viruses shows minimal regional variation and dominance of non-tailed viruses.

Authors:  Jennifer R Brum; Ryan O Schenck; Matthew B Sullivan
Journal:  ISME J       Date:  2013-05-02       Impact factor: 10.302

7.  Unveiling of the diversity of Prasinoviruses (Phycodnaviridae) in marine samples by using high-throughput sequencing analyses of PCR-amplified DNA polymerase and major capsid protein genes.

Authors:  Camille Clerissi; Nigel Grimsley; Hiroyuki Ogata; Pascal Hingamp; Julie Poulain; Yves Desdevises
Journal:  Appl Environ Microbiol       Date:  2014-03-14       Impact factor: 4.792

8.  Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus.

Authors:  Evelyne Derelle; Adam Monier; Richard Cooke; Alexandra Z Worden; Nigel H Grimsley; Hervé Moreau
Journal:  J Virol       Date:  2015-03-18       Impact factor: 5.103

9.  Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton.

Authors:  Adam Monier; Aurélie Chambouvet; David S Milner; Victoria Attah; Ramón Terrado; Connie Lovejoy; Hervé Moreau; Alyson E Santoro; Évelyne Derelle; Thomas A Richards
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-21       Impact factor: 11.205

10.  Marine prasinovirus genomes show low evolutionary divergence and acquisition of protein metabolism genes by horizontal gene transfer.

Authors:  Hervé Moreau; Gwenael Piganeau; Yves Desdevises; Richard Cooke; Evelyne Derelle; Nigel Grimsley
Journal:  J Virol       Date:  2010-09-22       Impact factor: 5.103

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