Literature DB >> 28827361

Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton.

Adam Monier1,2, Aurélie Chambouvet3,4, David S Milner3, Victoria Attah3, Ramón Terrado5, Connie Lovejoy2,6, Hervé Moreau7, Alyson E Santoro8, Évelyne Derelle7, Thomas A Richards1.   

Abstract

Phytoplankton community structure is shaped by both bottom-up factors, such as nutrient availability, and top-down processes, such as predation. Here we show that marine viruses can blur these distinctions, being able to amend how host cells acquire nutrients from their environment while also predating and lysing their algal hosts. Viral genomes often encode genes derived from their host. These genes may allow the virus to manipulate host metabolism to improve viral fitness. We identify in the genome of a phytoplankton virus, which infects the small green alga Ostreococcus tauri, a host-derived ammonium transporter. This gene is transcribed during infection and when expressed in yeast mutants the viral protein is located to the plasma membrane and rescues growth when cultured with ammonium as the sole nitrogen source. We also show that viral infection alters the nature of nitrogen compound uptake of host cells, by both increasing substrate affinity and allowing the host to access diverse nitrogen sources. This is important because the availability of nitrogen often limits phytoplankton growth. Collectively, these data show that a virus can acquire genes encoding nutrient transporters from a host genome and that expression of the viral gene can alter the nutrient uptake behavior of host cells. These results have implications for understanding how viruses manipulate the physiology and ecology of phytoplankton, influence marine nutrient cycles, and act as vectors for horizontal gene transfer.

Entities:  

Keywords:  Mamiellophyceae; NCLDV; Phycodnaviridae; lateral gene transfer; prasinophytes

Mesh:

Substances:

Year:  2017        PMID: 28827361      PMCID: PMC5594687          DOI: 10.1073/pnas.1708097114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  89 in total

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Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Optimization of procedures for counting viruses by flow cytometry.

Authors:  Corina P D Brussaard
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

3.  Functional metagenomic profiling of nine biomes.

Authors:  Elizabeth A Dinsdale; Robert A Edwards; Dana Hall; Florent Angly; Mya Breitbart; Jennifer M Brulc; Mike Furlan; Christelle Desnues; Matthew Haynes; Linlin Li; Lauren McDaniel; Mary Ann Moran; Karen E Nelson; Christina Nilsson; Robert Olson; John Paul; Beltran Rodriguez Brito; Yijun Ruan; Brandon K Swan; Rick Stevens; David L Valentine; Rebecca Vega Thurber; Linda Wegley; Bryan A White; Forest Rohwer
Journal:  Nature       Date:  2008-03-12       Impact factor: 49.962

Review 4.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

5.  Viral serine palmitoyltransferase induces metabolic switch in sphingolipid biosynthesis and is required for infection of a marine alga.

Authors:  Carmit Ziv; Sergey Malitsky; Alaa Othman; Shifra Ben-Dor; Yu Wei; Shuning Zheng; Asaph Aharoni; Thorsten Hornemann; Assaf Vardi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-16       Impact factor: 11.205

6.  Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.

Authors:  Christopher J Gobler; Dianna L Berry; Sonya T Dyhrman; Steven W Wilhelm; Asaf Salamov; Alexei V Lobanov; Yan Zhang; Jackie L Collier; Louie L Wurch; Adam B Kustka; Brian D Dill; Manesh Shah; Nathan C VerBerkmoes; Alan Kuo; Astrid Terry; Jasmyn Pangilinan; Erika A Lindquist; Susan Lucas; Ian T Paulsen; Theresa K Hattenrath-Lehmann; Stephanie C Talmage; Elyse A Walker; Florian Koch; Amanda M Burson; Maria Alejandra Marcoval; Ying-Zhong Tang; Gary R Lecleir; Kathryn J Coyne; Gry M Berg; Erin M Bertrand; Mak A Saito; Vadim N Gladyshev; Igor V Grigoriev
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-23       Impact factor: 11.205

7.  Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism.

Authors:  Luke R Thompson; Qinglu Zeng; Libusha Kelly; Katherine H Huang; Alexander U Singer; Joanne Stubbe; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-15       Impact factor: 11.205

8.  The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli.

Authors:  Lei Zheng; Dirk Kostrewa; Simon Bernèche; Fritz K Winkler; Xiao-Dan Li
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-24       Impact factor: 11.205

9.  trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.

Authors:  Salvador Capella-Gutiérrez; José M Silla-Martínez; Toni Gabaldón
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

10.  Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.

Authors:  Pascal Hingamp; Nigel Grimsley; Silvia G Acinas; Camille Clerissi; Lucie Subirana; Julie Poulain; Isabel Ferrera; Hugo Sarmento; Emilie Villar; Gipsi Lima-Mendez; Karoline Faust; Shinichi Sunagawa; Jean-Michel Claverie; Hervé Moreau; Yves Desdevises; Peer Bork; Jeroen Raes; Colomban de Vargas; Eric Karsenti; Stefanie Kandels-Lewis; Olivier Jaillon; Fabrice Not; Stéphane Pesant; Patrick Wincker; Hiroyuki Ogata
Journal:  ISME J       Date:  2013-04-11       Impact factor: 10.302

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  24 in total

1.  Marine microbiology: Algal virus boosts nitrogen uptake in the ocean.

Authors:  Ashley York
Journal:  Nat Rev Microbiol       Date:  2017-09-13       Impact factor: 60.633

Review 2.  Giant virus biology and diversity in the era of genome-resolved metagenomics.

Authors:  Frederik Schulz; Chantal Abergel; Tanja Woyke
Journal:  Nat Rev Microbiol       Date:  2022-07-28       Impact factor: 78.297

3.  Systematic evaluation of horizontal gene transfer between eukaryotes and viruses.

Authors:  Nicholas A T Irwin; Alexandros A Pittis; Thomas A Richards; Patrick J Keeling
Journal:  Nat Microbiol       Date:  2021-12-31       Impact factor: 30.964

4.  Prasinovirus Attack of Ostreococcus Is Furtive by Day but Savage by Night.

Authors:  Evelyne Derelle; Sheree Yau; Hervé Moreau; Nigel H Grimsley
Journal:  J Virol       Date:  2018-01-30       Impact factor: 5.103

5.  Rapidity of Genomic Adaptations to Prasinovirus Infection in a Marine Microalga.

Authors:  Sheree Yau; Gaëtan Caravello; Nadège Fonvieille; Élodie Desgranges; Hervé Moreau; Nigel Grimsley
Journal:  Viruses       Date:  2018-08-19       Impact factor: 5.048

6.  Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters.

Authors:  M Consuelo Gazitúa; Dean R Vik; Simon Roux; Ann C Gregory; Benjamin Bolduc; Brittany Widner; Margaret R Mulholland; Steven J Hallam; Osvaldo Ulloa; Matthew B Sullivan
Journal:  ISME J       Date:  2020-11-16       Impact factor: 10.302

7.  Host and pathogen autophagy are central to the inducible local defences and systemic response of the giant kelp Macrocystis pyrifera against the oomycete pathogen Anisolpidium ectocarpii.

Authors:  Pedro Murúa; Dieter G Müller; Mohammad Etemadi; Pieter van West; Claire M M Gachon
Journal:  New Phytol       Date:  2020-02-29       Impact factor: 10.151

8.  Genes for Membrane Transport Proteins: Not So Rare in Viruses.

Authors:  Timo Greiner; Anna Moroni; James L Van Etten; Gerhard Thiel
Journal:  Viruses       Date:  2018-08-26       Impact factor: 5.048

9.  A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators.

Authors:  David M Needham; Susumu Yoshizawa; Toshiaki Hosaka; Camille Poirier; Chang Jae Choi; Elisabeth Hehenberger; Nicholas A T Irwin; Susanne Wilken; Cheuk-Man Yung; Charles Bachy; Rika Kurihara; Yu Nakajima; Keiichi Kojima; Tomomi Kimura-Someya; Guy Leonard; Rex R Malmstrom; Daniel R Mende; Daniel K Olson; Yuki Sudo; Sebastian Sudek; Thomas A Richards; Edward F DeLong; Patrick J Keeling; Alyson E Santoro; Mikako Shirouzu; Wataru Iwasaki; Alexandra Z Worden
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

10.  Giant virus diversity and host interactions through global metagenomics.

Authors:  Frederik Schulz; Simon Roux; David Paez-Espino; Sean Jungbluth; David A Walsh; Vincent J Denef; Katherine D McMahon; Konstantinos T Konstantinidis; Emiley A Eloe-Fadrosh; Nikos C Kyrpides; Tanja Woyke
Journal:  Nature       Date:  2020-01-22       Impact factor: 49.962

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