Literature DB >> 19644456

Probing the basis for genotype-phenotype relationships.

Byung-Kwan Cho, Bernhard Ø Palsson.   

Abstract

Transposon mutagenesis coupled with microarray analysis helps to rapidly generate information about changing genotype-phenotype relationships in laboratory-evolved bacteria.

Mesh：

Substances：

Year:  2009        PMID： 19644456     DOI： 10.1038/nmeth0809-565

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


  9 in total

1.  Genomic evolution during a 10,000-generation experiment with bacteria.

Authors:  D Papadopoulos; D Schneider; J Meier-Eiss; W Arber; R E Lenski; M Blot
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

Review 2.  Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation.

Authors:  Santiago F Elena; Richard E Lenski
Journal:  Nat Rev Genet       Date:  2003-06       Impact factor: 53.242

3.  Metabolic gene-deletion strains of Escherichia coli evolve to computationally predicted growth phenotypes.

Authors:  Stephen S Fong; Bernhard Ø Palsson
Journal:  Nat Genet       Date:  2004-09-26       Impact factor: 38.330

4.  Global transposon mutagenesis and a minimal Mycoplasma genome.

Authors:  C A Hutchison; S N Peterson; S R Gill; R T Cline; O White; C M Fraser; H O Smith; J C Venter
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

5.  Analysis of genetic systems using experimental evolution and whole-genome sequencing.

Authors:  Matthew Hegreness; Roy Kishony
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

6.  Impact of individual mutations on increased fitness in adaptively evolved strains of Escherichia coli.

Authors:  M Kenyon Applebee; Markus J Herrgård; Bernhard Ø Palsson
Journal:  J Bacteriol       Date:  2008-05-16       Impact factor: 3.490

7.  Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale.

Authors:  Christopher D Herring; Anu Raghunathan; Christiane Honisch; Trina Patel; M Kenyon Applebee; Andrew R Joyce; Thomas J Albert; Frederick R Blattner; Dirk van den Boom; Charles R Cantor; Bernhard Ø Palsson
Journal:  Nat Genet       Date:  2006-11-05       Impact factor: 38.330

8.  Global discovery of adaptive mutations.

Authors:  Hani Goodarzi; Alison K Hottes; Saeed Tavazoie
Journal:  Nat Methods       Date:  2009-07-13       Impact factor: 28.547

Review 9.  Fitness and its role in evolutionary genetics.

Authors:  H Allen Orr
Journal:  Nat Rev Genet       Date:  2009-08       Impact factor: 53.242
  9 in total
  1 in total

Review 1.  Biochemistry, genetics and biotechnology of glycerol utilization in Pseudomonas species.

Authors:  Ignacio Poblete-Castro; Christoph Wittmann; Pablo I Nikel
Journal:  Microb Biotechnol       Date:  2019-03-18       Impact factor: 5.813
  1 in total

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